DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and acsl4a

DIOPT Version :10

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_956943.1 Gene:acsl4a / 393622 ZFINID:ZDB-GENE-040426-1565 Length:706 Species:Danio rerio


Alignment Length:757 Identity:173/757 - (22%)
Similarity:308/757 - (40%) Gaps:184/757 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPATSYRSTSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSGNDG--- 66
            :|...||||...::: :.:|.|..       .|:.:.|..:.|::..|..|......||::.   
Zfish    50 QPDGPYRSTDRFESL-VTVDFPGK-------DTLDKLFDYAVERFGKLDCLGTREVLSGDNETQP 106

  Fly    67 ----WTTLTFGEYQER--------VEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGA 119
                :..|..|||:.:        |......|.::|.:.:|::.|......||........|...
Zfish   107 NGKVFKKLILGEYKWKSYEELDIEVSHFGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNF 171

  Fly   120 VVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQM--AKLRAIKERLPRLKAVIQLHGPFEAFVDH 182
            .:...|.:...:||.:.|  .||.|..:..:.::  .||:::..::|.||.:|        :||.
Zfish   172 PLVTFYATLGEDAVAYGL--NESGVTHLVTSIELLETKLKSVLLQIPNLKHII--------YVDS 226

  Fly   183 EPGYFSWQKLQEQTFSSELKEELLARESRIR-------ANECAMLIFTSGTVGMPKAVMLSHDNL 240
            :....:......|..|....|||.|:...:.       .::.|::::|||:.|.||.||:.|.||
Zfish   227 KSMNTAGFPQGIQIHSMHSVEELGAKPENLNRPIVKPVPSDLAVIMYTSGSTGRPKGVMIIHSNL 291

  Fly   241 VFDTKSAAAHMQDIQVGKESFVSYLPLSHV---AAQIFDVFLG--LSHAGCVTFADKDALKGTLI 300
            :.........:..:. .|:::::||||:||   .|:|..|..|  :.::...|.:|    :.|.|
Zfish   292 IGGMAGQCERIPGLG-PKDTYIAYLPLAHVLEMTAEISCVTYGCRIGYSSPQTLSD----QSTKI 351

  Fly   301 KTFRKA-----RPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEHQTTLMAGKSP 360
            |...|.     :|:.|..||.:.:::.:.:::...:.....|.|...|.....|.   :..|...
Zfish   352 KKGSKGDCSVLKPSLMAAVPEIMDRINKNVMSKVQEMSCVQRTLFKPAYDYKLEQ---IKKGYDA 413

  Fly   361 SIYGNAKYWLACRVV-KPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIA----LGECYGMSE 420
            .:         |.:: |.:|.::| .|.|:..:||||.|...::|   ::|.    :|:.||::|
Zfish   414 PL---------CNILFKKVRALLG-GNVRMMLSGGAPLSPATQRF---MNICFCCPVGQGYGLTE 465

  Fly   421 TSGAITLNVDISNLYSAGQA--------------CEGVTLKIHEPDCNGQGEILMRGRLVFMGYL 471
            |.||.|: .:::: ||.|:.              .||...|..:|  :.:||||:.|..|.|||.
Zfish   466 TCGAGTI-TEVAD-YSTGRVGAPLICCEVKLKDWAEGGYTKRDKP--HPRGEILIGGPNVTMGYY 526

  Fly   472 GLPDKTEETVKED--------GWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELI 528
                :||....:|        .|..:||:|.:...|.|.|..|.|:|:....||.:....:|..:
Zfish   527 ----RTEGCNNDDFFVDQNGQRWFCTGDIGEMHADGCLQIVDRKKDLVKLQAGEYVSLGKVESAL 587

  Fly   529 KKELPC--VSNVL------------LIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRD 579
            |.   |  |.|:.            .|..::|.||.|.:.|       ||      |.|.|    
Zfish   588 KN---CSFVDNICAYANSDQNYVISFIVPNQKKLTALANQK-------GI------EGTWE---- 632

  Fly   580 LDIHETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKFA 644
                     |:.|.|                  ..:.::|..|:|         ::|:.|:|:|.
Zfish   633 ---------EICNHP------------------VMEREVLREIKE---------VANSIKLQRFE 661

  Fly   645 L--IAH----EFSVATGELGPTLKIRRNIVHAKYAKVIERLY 680
            :  :.|    .::..||.:....|::|..:...|...|||:|
Zfish   662 IPVMVHLSPEPWTPETGLVTDAFKLKRKELKNHYLNDIERMY 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 Adenylate forming domain, Class I superfamily 62..680 CDD:473059 160/698 (23%)
acsl4aNP_956943.1 LC_FACS_euk1 117..691 CDD:341294 153/668 (23%)
PRK04813 <230..>292 CDD:235313 17/61 (28%)

Return to query results.
Submit another query.