DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and CG5568

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster


Alignment Length:656 Identity:133/656 - (20%)
Similarity:227/656 - (34%) Gaps:196/656 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLS 88
            ::.|.||   |..:|.|...:..|:.:.|.|.:..|..      |.||:.:.|....:.|..:..
  Fly    28 EKRSLFS---PDLSIGEIIFQQMERNAMLTAQISVTEN------TELTWKDIQTNAMKVASYMRK 83

  Fly    89 VGVEERSSVGI----------LAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESS 143
            :|:|:...||:          ||:.|   ||       .|.....::......|:..:....:..
  Fly    84 LGLEQGDFVGVIGRLTTHLTALAYAC---FF-------NGTPYHALHTEYEQSAIERLFGITKPR 138

  Fly   144 VCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLAR 208
            : :..|..:..|::|..:.|.     :|:    ....:|..|....|.:.....      |:..|
  Fly   139 L-IFCDGDEFEKVQAATKGLQ-----VQI----VTMRNHPAGILRIQDILTTPV------EMNFR 187

  Fly   209 ESRIR--ANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGK-----ESFVSYLP 266
            ..|::  .::...::.:|||.|:||||.:|:.:.:              :|.     .|.:.|.|
  Fly   188 PVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQI--------------IGSFLPVDSSIIQYNP 238

  Fly   267 ---------LSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQ 322
                     ...:.|.:|      |....:...|.|              |..:.|   :.||.:
  Fly   239 NTLDWASGITMTINAAVF------SLTSIIEDCDFD--------------PANLCG---LIEKYR 280

  Fly   323 ERLVAAEAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNC 387
            ..:|...:     |:|               .|....|..|.                 ..:.:.
  Fly   281 ISMVFVSS-----SQL---------------AMLSNCPEFYA-----------------ADLSSV 308

  Fly   388 RVFFTGGAPTSEELKQFFLGLDIALGECYGMSET------SGAITLNVDISNLYSAGQACEGVTL 446
            :.||.||:..|.|::......  ...||...|.|      .|.:..|.| ....|.|:...|:.:
  Fly   309 KYFFYGGSNCSLEVQNKIRSR--LSNECVNFSYTLTELNSPGCLNFNFD-EKPNSVGRPVRGIQI 370

  Fly   447 KI-----HEPDCNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGR 506
            ||     .....|..|||.......:.||...|::|::....:.|.|:|||||:|..|.|.|..|
  Fly   371 KIVNELGEAQGPNVVGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDR 435

  Fly   507 LKELIITAGGENIP--PVHIEELIKKELP-----CVSNVL--LIGDHRKYLTVLLSLKTKCDAKT 562
            ||:::   ..:.|.  |..||.:| .|:|     ||..:.  :.||......|         .|.
  Fly   436 LKDML---KYQTIMYYPSEIESVI-AEMPNVVEACVFGIWDPVYGDKAAASVV---------KKQ 487

  Fly   563 GIPLDALREETIEWLRDLDIHETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIK 627
            |..|:|  ::.:|::|.            .|||..:..|..|.:...:           |:.|.:
  Fly   488 GTQLEA--QDVVEYVRK------------RIPAKFKQLNGGALIVDHI-----------IQSGNR 527

  Fly   628 RANKYA 633
            :||:.|
  Fly   528 KANRAA 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 123/618 (20%)
CG5568NP_647992.1 CaiC 35..540 CDD:223395 130/646 (20%)
Firefly_Luc_like 55..530 CDD:213279 122/621 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452218
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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