DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and CG8834

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster


Alignment Length:513 Identity:122/513 - (23%)
Similarity:195/513 - (38%) Gaps:131/513 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 DGWTTLTFGE---YQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYP 126
            || .|:||.:   :..|:.|   .|...|:..:..:||.|.|...........|..|.....|.|
  Fly    52 DG-VTVTFEQGLTWSIRIAQ---YLKKRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNP 112

  Fly   127 SNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQK 191
            ......:.||.:..:.:: :..|.|:..|:.         ||.:..|.......||..|....:.
  Fly   113 VLDDATLTHVFSITKPTL-IFCDGQEYDKVH---------KATVGWHPEILTLTDHVEGVQGIET 167

  Fly   192 LQEQTFSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQV 256
            |.:.|.:.::.:..:.:|.   .::...::.:|||.|:||||.:|:..|:          ||..:
  Fly   168 LLDPTTTEKIYQPEVLKEG---GDQTVAILCSSGTTGLPKAVCISNSILI----------QDSML 219

  Fly   257 GKESFVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKL 321
            .....|.|:                  ..|:     |.:.|.....|     :.:||..|:... 
  Fly   220 ITSQSVIYV------------------GSCL-----DWITGLWAFVF-----STVFGCTRIISN- 255

  Fly   322 QERLVAAEAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDN 386
                                  :|...|:...|:          .||.:...|:.| |.:..:..
  Fly   256 ----------------------KAFTPEYFVGLV----------KKYKINYAVLPP-RHLSALIT 287

  Fly   387 C------------RVFFTGGA------PTSEEL---KQFFLGLDIALGECYGMSETSGAITLNVD 430
            |            .:.:.||:      ..|:||   ..|..|        |||:|. ||||:|:.
  Fly   288 CPDAKPDALAPITHLNYGGGSISLATLQRSQELCKTAMFNSG--------YGMTEV-GAITINIG 343

  Fly   431 ISNLYSAGQACEGVTLKIHEPD-----CNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSG 490
            |||:.|||:...|:.::|.:.|     .|..|||.:.....:.||.|.|.:|......:||.|:|
  Fly   344 ISNVSSAGRPVPGIKIRIVDEDGKSLGYNQVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTG 408

  Fly   491 DLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIKKELPCVSNVLLIG--DHRK 546
            ||||.|.:..|.|..|.|| |:...|.:..|..||.:| .||..|.:|.::|  |.|:
  Fly   409 DLGYFDEQNFLYIVDRKKE-ILKYNGLHYWPTEIETVI-AELSQVQDVCVVGIYDERE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 122/513 (24%)
CG8834NP_610779.1 CaiC 20..529 CDD:223395 122/513 (24%)
AFD_class_I 46..519 CDD:302604 122/513 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452225
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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