DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and acsl4b

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001093209.1 Gene:acsl4b / 334561 ZFINID:ZDB-GENE-030131-6493 Length:671 Species:Danio rerio


Alignment Length:748 Identity:182/748 - (24%)
Similarity:295/748 - (39%) Gaps:165/748 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPATSYRSTSLHDAV------------KLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVW 57
            :|...||:....||:            ||.:....||:| .|.....|...|..||..:  ..::
Zfish    14 RPEGPYRAVESIDALVTQGFEGVDTLDKLFVHAVKSFNQ-APCLGTREVLSEEEEKQPN--GKIF 75

  Fly    58 ETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVA 122
            :....||..|  :::....:.||.....|.::|.:.|.::.|......||..|.....|....:.
Zfish    76 KKLVLGNYSW--MSYEAVDQAVESFGSGLAALGQKPRQTIAIFCETRAEWMIAAQACFRRNYPLV 138

  Fly   123 GVYPSNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYF 187
            .:|.:...:||.:.|....::..:.......:||:.:...:..|:.||.: |..|......|...
Zfish   139 TLYATLGEDAVAYGLNQCGATHLITSTELLQSKLKNVLFAVSGLQHVIYV-GSGEVHQADYPQSL 202

  Fly   188 SWQKLQEQTFSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQ 252
            ....:||.|......|.|.....|..|::.|::::|||:.|.||.|.:.|.||:   ...|...|
Zfish   203 IIHSMQEVTELGAKPENLSVEYERPSASDLAVVMYTSGSTGNPKGVKMQHSNLI---AGMAGQCQ 264

  Fly   253 DIQ-VG-KESFVSYLPLSHVAAQIFDVFLGLSHAGC-VTFADKDAL--KGTLIKTFRKA-----R 307
            .|. :| :::.||||||:||.....::.. ||| || :.::....|  :.:.||...|.     :
Zfish   265 RIPGLGSQDTIVSYLPLAHVLELTAEISC-LSH-GCRLGYSSPHTLTDQSSKIKKGSKGDCSVLK 327

  Fly   308 PTKMFGVPRVFE--------KLQERLV--------AAEAKARPYSRLLLARARAAVAEHQTTLMA 356
            ||.:..||.:.:        ||||..|        ..:.|.:..|:                  .
Zfish   328 PTLIAAVPEIMDRICKNVNGKLQEMSVIKRTLFKLGFDYKLQQVSK------------------G 374

  Fly   357 GKSPSIYGNAKYWLACRVV--KPIREMIGVDNC-RVFFTGGAPTSEELKQFF--LGLDIALGECY 416
            ..||          .|.::  |.:..::|  .| |...:||||.|...::|.  ....||:|  |
Zfish   375 ADSP----------MCDMLFFKQVNVLLG--GCVRRMLSGGAPLSASTQRFMNVCFCPIAVG--Y 425

  Fly   417 GMSETSGAITLNVDISNLYSAGQA-----CEGVTLK-------IHEPDCNGQGEILMRGRLVFMG 469
            |::||.||.|:: |.|: ||.|:.     |..:.|:       ..:...:.:||||:.|..|.||
Zfish   426 GLTETCGAGTIS-DSSD-YSTGRVGAPLICSEIKLRDWPEGGYTSQDKPHPRGEILIGGPNVAMG 488

  Fly   470 YLGLPDKTEET---VKEDG--WLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIK 529
            |.|...:.:..   |.|.|  |..:||:|.:.|.|.|.|..|.|:|:....||.:....:|..:|
Zfish   489 YYGSEGEGQNDNFWVDEAGQRWFSTGDIGEVHPDGCLEIVDRKKDLVKLQAGEYVSLGKVEAAMK 553

  Fly   530 KELPCVSNVLL------------IGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRDLDI 582
            .. |.:.|:.:            :..::|.||.|..       |:||  |.      || .|:..
Zfish   554 NS-PLIDNICVYASSDQNYVISFVVPNQKNLTELAK-------KSGI--DG------EW-DDICN 601

  Fly   583 HETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKFALIA 647
            |.....|:|.:..::       |:.:.||....|                        ||..|.:
Zfish   602 HTMMEEEVLKVIKEI-------AVTSKLERFEVP------------------------QKIRLSS 635

  Fly   648 HEFSVATGELGPTLKIRRNIVHAKYAKVIERLY 680
            ..::..||.:....|::|..:...|.|.|||||
Zfish   636 EPWTPETGLVTDAFKLKRKELKNHYMKDIERLY 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 165/677 (24%)
acsl4bNP_001093209.1 PLN02387 26..668 CDD:215217 177/734 (24%)
LC-FACS_euk 81..668 CDD:213293 165/676 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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