DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and CG18155

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_996360.2 Gene:CG18155 / 31668 FlyBaseID:FBgn0029945 Length:610 Species:Drosophila melanogaster


Alignment Length:592 Identity:112/592 - (18%)
Similarity:191/592 - (32%) Gaps:214/592 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 SSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHV----------------------- 136
            |:|..|..|...|...::....:|.|..   |..|.:|:..:                       
  Fly    95 SNVTYLCSNNALWIAIQWSCWISGQVAV---PLESGQAIDQLQRQASNCKTKLLIATKEFESLAQ 156

  Fly   137 -LATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSE 200
             |:.|..|..::.|...:....::.......|.::.:.|..               :.|.||.::
  Fly   157 ELSQGVKSATIILDHSFLPTAESVSSTSMYAKQLVAIQGVI---------------VTENTFPND 206

  Fly   201 LKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVG------KE 259
                       ..:...||||:|...|..||.|:|:|.|:       .|.|:.: :|      .:
  Fly   207 -----------FYSKAPAMLIYTPNAVNSPKPVLLTHRNI-------EAQMRCL-IGTWHLGPTD 252

  Fly   260 SFVSYLPLSHVAAQIFDVFLGLSHAGCVTFADK-------DALKGTLIKTFRKARPTKMFGVPRV 317
            ..:..|.::.:.|.:..|   ||..|.|....|       .||.|  |.:..|.|.|....:|.|
  Fly   253 CMLPILSMNRMHAALAAV---LSVGGNVVLQQKFDGHNAWSALLG--INSPSKQRVTLFLAMPIV 312

  Fly   318 FEKL---QERLVAAEAKARPYSRLLLARARAAVAEH---QTTLMAGKSPSIYGNAKY-WLACRVV 375
            :::|   .|::.|.:::...|           :..|   :..|||.....:..:..| |      
  Fly   313 YKRLIVEYEKMFAKDSRMVEY-----------IVNHCRQKIRLMATAFALLPDSVFYRW------ 360

  Fly   376 KPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIALGECYGMSET------------------- 421
               ||:.|.:                          :.|.|||.||                   
  Fly   361 ---REITGQN--------------------------IYEYYGMMETGLVLGHPLNKRQRDSPHNG 396

  Fly   422 -SGAITLNVDISNLY---SAGQACEGVTLK------------------------IHEPDCNGQ-- 456
             :.....|....|.|   :.|...:|||.:                        |...|..|.  
  Fly   397 PTAVAMANNTAPNDYRPGTLGSPLKGVTARLISNKGDELITCKNELGGSVDSGLIPVEDIGGDAS 461

  Fly   457 ------GEILMRG-RLVF---------MGYLGLPDKTEETVKEDGWLHSGDL-GYIDPKGNLIIS 504
                  ||:.:.| .||.         |.:.|..:..|:...:||:..:||: .|  ..||....
  Fly   462 LAGTIIGELQIAGSNLVSNTLANNNQEMEHKGTTNNEEQENNQDGFFKTGDICAY--RNGNFYFL 524

  Fly   505 GRLKELIITAGGENIPPVHIEELIKKELPCVSNVLLIG------DHRKYLTVLLSLKTKCDAKTG 563
            .:..: |.|.||..:....|::::... |.:::|.::|      .||  |.|:..:....|    
  Fly   525 SKSSD-IFTVGGYKVYGSEIKKVLISH-PNINDVAVLGIPNKMWGHR--LGVICIVSPDAD---- 581

  Fly   564 IPLDALR 570
            |.|||::
  Fly   582 IDLDAIK 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 112/592 (19%)
CG18155NP_996360.2 CaiC 53..604 CDD:223395 112/592 (19%)
AFD_class_I 58..607 CDD:302604 112/592 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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