DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and LOC316124

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_006244385.1 Gene:LOC316124 / 316124 RGDID:1595856 Length:705 Species:Rattus norvegicus


Alignment Length:695 Identity:216/695 - (31%)
Similarity:347/695 - (49%) Gaps:63/695 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SYRSTSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSG-NDGWTTLTF 72
            :|.::.....|:||:.:  :..:..||.|:|:....:..|||...|:     ||. ...|..||:
  Rat    48 NYWTSKREGQVQLRMGK--NPLENEPPVTVPDLIMSAATKYSHYLAI-----GSKYKKSWQVLTY 105

  Fly    73 GEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVL 137
            .||.|...:||...|.||:|....|||:..|..||..|..||:.||.:..|:..|||.:|...:.
  Rat   106 IEYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSNSPKACQIIA 170

  Fly   138 ATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQE--QTFSSE 200
            .|.|..:.|||:.:|:.|:..|:..|..|||:||..   |...:.:|..:||:...:  ...|.|
  Rat   171 ETSEMDIFVVDNDRQLQKVNQIQGYLKHLKAIIQYR---EDIQEVQPNLYSWKGFLDLADGISDE 232

  Fly   201 LKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQV-----GKES 260
            ..::::..:   :.|:|..|::..||.|.|||:||||||:.:.|   ||.:|.:..     |:|.
  Rat   233 KLDQIIDAQ---KPNQCCALVYNQGTTGNPKAIMLSHDNITWTT---AATVQSLGYKCPPHGQEI 291

  Fly   261 FVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALK----------GTLIKTFRKARPTKMFGVP 315
            .||||||.....||.||::.:|.||.|.|...::.|          |.|::..|:.:||...|:|
  Rat   292 LVSYLPLCFAGIQILDVWVAISVAGTVYFPSLESGKWSGLPRVSGTGFLMELLREVQPTTFCGIP 356

  Fly   316 RVFEKLQERLVAAEAKARPYSRLLLARA-RAAVAEHQTTLMAG-KSPSIYGNAKYWLACRVV-KP 377
            .|::::.:.|......:..:.|.:...| |..::.::..:|.| ..|..:|.||     |:. ||
  Rat   357 WVWDRMLDSLKTKHLDSTAFRRKIDRWAMRMGLSTNKRQMMGGIHQPLCFGLAK-----RLTFKP 416

  Fly   378 IREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIALGECYGMSETSGAITL-NVDISNLYSAGQAC 441
            .::.:|:::|..|...|.........|||.::|.:.|.||:||.:|..|| ::....:.|:|:|.
  Rat   417 AKKFLGLNHCEQFLNVGMGLPRSTLDFFLSMNIPILELYGLSECTGLHTLSSLQAYRILSSGKAL 481

  Fly   442 EGVTLKIHEPDCNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGR 506
            .....|:.:.:.:|.|.:.:.||.||||||.....||..|...||||:.|||::|....|.::|.
  Rat   482 PKTHTKVEKENQDGVGNLCIWGRHVFMGYLRDKHSTERKVDNHGWLHTNDLGFLDFDKYLYVTGN 546

  Fly   507 LKELIITAGGENIPPVHIEELIKKELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPLDALRE 571
            ..:||....||.:.|:.|||.::..:|.|...:|:|....||..||:||.:.:.:||.....|..
  Rat   547 TNDLIRLNSGEMVNPIPIEERVRTRIPLVRYAMLVGQDAPYLCALLTLKCQINPETGEAQGNLTS 611

  Fly   572 ETIEWLRDLDIHETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISN 636
            |.|...|.|....|.||::|                    ....|.:.:.|::||:..|..|.|.
  Rat   612 EAIACCRKLRSQSTWLSDVL--------------------YNRDPLVTQFIDQGIQDVNSEAPSV 656

  Fly   637 AQKVQKFALIAHEFSVATGELGPTLKIRRNIVHAKYAKVIERLYK 681
            ..|:.|:.::.::|||..|||||..|:.|:.|...|.:.|::||:
  Rat   657 GAKIIKWVILDNDFSVDGGELGPMSKMNRSTVIKIYKEEIQKLYE 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 201/639 (31%)
LOC316124XP_006244385.1 FAA1 74..701 CDD:223953 209/665 (31%)
ACSBG_like 95..700 CDD:213299 200/638 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342978
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D218492at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101481
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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