DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and Slc27a5

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_033538.2 Gene:Slc27a5 / 26459 MGIID:1347100 Length:689 Species:Mus musculus


Alignment Length:674 Identity:140/674 - (20%)
Similarity:225/674 - (33%) Gaps:177/674 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PPQTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALML-------LSVGV 91
            ||:|..:..:.....:.|..|||.    :|::| :::|..:...|..|||.:|       :....
Mouse   111 PPETFVDALERQALAWPDRVALVC----TGSEG-SSITNSQLDARSCQAAWVLKAKLKDAVIQNT 170

  Fly    92 EERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYP-SNSAEAVHHVLATGESSVCVVDDAQQMAK 155
            .:.:::.:|............|..:.|..||.:.| |.....:|.|.::|.|.:.|..|.|:   
Mouse   171 RDAAAILVLPSKTISALSVFLGLAKLGCPVAWINPHSRGMPLLHSVRSSGASVLIVDPDLQE--- 232

  Fly   156 LRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLARESRIRANECAML 220
              .::|.||:|.|. .:|..:.......||..:.....:...|..:...|.|   .|:....|:.
Mouse   233 --NLEEVLPKLLAE-NIHCFYLGHSSPTPGVEALGASLDAAPSDPVPASLRA---TIKWKSPAIF 291

  Fly   221 IFTSGTVGMPKAVMLSH-----------------DNLVFDTKSAAAHMQDIQVGKESFVSYLPLS 268
            ||||||.|:||..:|||                 |::|:|.                    |||.
Mouse   292 IFTSGTTGLPKPAILSHERVIQVSNVLSFCGCRADDVVYDV--------------------LPLY 336

  Fly   269 HVAAQIFDVFLGLSHAG--CVTFADKDALKGTLIKTFRKAR---PTKMFGVPRVFEKLQERLVAA 328
            |....:.. |||....|  ||           |...|..:|   ..:..||..:....:......
Mouse   337 HTIGLVLG-FLGCLQVGATCV-----------LAPKFSASRFWAECRQHGVTVILYVGEILRYLC 389

  Fly   329 EAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVF-FT 392
            ....:|..::           |...|..|..          |...|.|..::..|  ..|:: |.
Mouse   390 NVPEQPEDKI-----------HTVRLAMGNG----------LRANVWKNFQQRFG--PIRIWEFY 431

  Fly   393 GGAPTSEELKQFFLGLDIALGECYGMSETSGAITL-------NVDISNLYSAGQACEGVTLKIHE 450
            |....:       :||...:|.|..:..||..:.:       ..||......... :|..:.: |
Mouse   432 GSTEGN-------VGLMNYVGHCGAVGRTSCILRMLTPFELVQFDIETAEPLRDK-QGFCIPV-E 487

  Fly   451 PDCNGQGEILMRGRLVFMGYLGLPDKTEETVK--------EDGWLHSGDLGYIDPKGNLIISGRL 507
            |...|.....:|....|:||.|  .:.|...|        .|.:.::||:..:|.:|......||
Mouse   488 PGKPGLLLTKVRKNQPFLGYRG--SQAESNRKLVANVRRVGDLYFNTGDVLTLDQEGFFYFQDRL 550

  Fly   508 KELIITAGGENIPPVHIEELIKKELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPL------ 566
            .: .....|||:....:|        ||.:.|   |..:.:.|.......|:.|.|:..      
Mouse   551 GD-TFRWKGENVSTGEVE--------CVLSSL---DFLEEVNVYGVPVPGCEGKVGMAAVKLAPG 603

  Fly   567 -----DALREETIEWLRDLDI-HETRLSELLNIPADLQLPNDTAALAATLEITAKPKLL------ 619
                 ..|.:....||..... |..|:.:                   :||||...||:      
Mouse   604 KTFDGQKLYQHVRSWLPAYATPHFIRIQD-------------------SLEITNTYKLVKSRLVR 649

  Fly   620 EAIEEGIKRANKYAISNAQKVQKF 643
            |..:.||.....|.:.|  |.|.|
Mouse   650 EGFDVGIIADPLYILDN--KAQTF 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 133/646 (21%)
Slc27a5NP_033538.2 PRK08279 100..685 CDD:236217 140/674 (21%)
AFD_class_I 139..679 CDD:302604 132/642 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839230
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.