DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and Acsl1

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:680 Identity:172/680 - (25%)
Similarity:292/680 - (42%) Gaps:111/680 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSS--VG 98
            :|:.:.|:...:..:|.|.|....|   |..:..:::.:..|..|.....|:..|.:..|.  :|
  Rat    91 RTMYDGFQRGIQVSNDGPCLGSRKP---NQPYEWISYKQVAEMAECIGSALIQKGFKPCSEQFIG 152

  Fly    99 ILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQMAK--LRAIKE 161
            |.:.|.|||...|.|......||..:|.:...:|:.:::...|.|| :..|..:.||  |..::.
  Rat   153 IFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSV-IFADKPEKAKLLLEGVEN 216

  Fly   162 RL-PRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLARESRIR-----ANECAML 220
            :| |.||.::.:.......|:.      .||...:....:..|: |.|.:|.:     ..:.|::
  Rat   217 KLTPCLKIIVIMDSYDNDLVER------GQKCGVEIIGLKALED-LGRVNRTKPKPPEPEDLAII 274

  Fly   221 IFTSGTVGMPKAVMLSHDNLVFD-------TKSA-AAHMQDIQVGKESFVSYLPLSHVAAQIFDV 277
            .|||||.|.||..|::|.|::.|       |:|| .|..:|:      .:|:|||:|:...:.:.
  Rat   275 CFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIASPEDV------LISFLPLAHMFETVVEC 333

  Fly   278 FLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLAR 342
            .: |.|...:.|...|.  ..|:...:..:||....|||:..::.:| :..:|.......||...
  Rat   334 VM-LCHGAKIGFFQGDI--RLLMDDLKVLQPTIFPVVPRLLNRMFDR-IFGQANTSVKRWLLDFA 394

  Fly   343 ARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVFFTGGAPTSEELKQFFLG 407
            ::...||    |.:|    |..|...|... :...|:..:| ...|:..||.||.|..:..|   
  Rat   395 SKRKEAE----LRSG----IVRNNSLWDKL-IFHKIQSSLG-GKVRLMITGAAPVSATVLTF--- 446

  Fly   408 LDIALG----ECYGMSETSGAITLNVDISNLYSAGQA-----CEGVTLKIHEPDCN-----GQGE 458
            |..|||    |.||.:|.:....|:  :...::||..     |..:.| :...|.|     |:||
  Rat   447 LRAALGCQFYEGYGQTECTAGCCLS--LPGDWTAGHVGAPMPCNYIKL-VDVEDMNYQAAKGEGE 508

  Fly   459 ILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVH 523
            :.::|..||.|||..|.:|.|.:.:|||||:||:|...|.|.|.|..|.|.:...|.||.|.|..
  Rat   509 VCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEK 573

  Fly   524 IEEL-IKKELPCVSNVLLIGDH-RKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRDLDIHETR 586
            ||.: ::.|  .|:.|.:.|:. :.:|..::           :|             |::|    
  Rat   574 IENIYLRSE--AVAQVFVHGESLQAFLIAIV-----------VP-------------DVEI---- 608

  Fly   587 LSELLNIPADLQLPNDTAALAATLEITAKPKLLEAI-EEGIKRANKYAISNAQKVQKFALIAHEF 650
                  :|:..|......:..   |:.....:.:|| |:.:|......:...::|:..|:....|
  Rat   609 ------LPSWAQKRGFQGSFE---ELCRNKDINKAILEDMVKLGKNAGLKPFEQVKGIAVHPELF 664

  Fly   651 SVATGELGPTLKIRRNIVHAKYAKVIERLY 680
            |:..|.|.||||.:|..:...:...|:.||
  Rat   665 SIDNGLLTPTLKAKRPELRNYFRSQIDELY 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 164/652 (25%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 165/651 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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