DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and acs-13

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001293196.1 Gene:acs-13 / 171643 WormBaseID:WBGene00022037 Length:726 Species:Caenorhabditis elegans


Alignment Length:666 Identity:175/666 - (26%)
Similarity:282/666 - (42%) Gaps:116/666 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KYSD--LPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVE--ERSSVGILAFNCPEWF 108
            |.||  :| .|||            ::....||.:..::....:||.  ...::||.:.|..||.
 Worm   140 KQSDGSIP-YVWE------------SYNTILERADNVSVAFRELGVPTGNAENIGIYSKNRAEWI 191

  Fly   109 FAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLH 173
            ..||.......|:..:|.:..:||...:|...|..:.|.||..:...|...||:.|.|..::.: 
 Worm   192 ITEFATYNYSNVIVPIYETLGSEASIFILNQAEIKIVVCDDISKATGLLKFKEQCPSLSTLVVM- 255

  Fly   174 GPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLARE--SRIRAN-------------ECAMLIFT 223
               |...|           :.:|.:|.|..|:|..|  .:|..|             :.|.:.:|
 Worm   256 ---EPVTD-----------ELKTTASSLGVEVLTFEDLEKIGKNAKTRPAHIPPTPEDLATICYT 306

  Fly   224 SGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGKESFVSYLPLSHVAAQIFDVFLGLSHAGCVT 288
            |||.|.||.|||:|.|::.|...............:|.:|:|||:|:..::.:     |...||.
 Worm   307 SGTTGTPKGVMLTHANVIADGVCMDFFKHSGIAATDSMISFLPLAHMLERVIE-----SVCFCVG 366

  Fly   289 FADKDALKG---TLIKTFRKARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEH 350
             |.....:|   .|.:..::.:||.:..||||..:|.:: |.:|.......::|...|.:..|..
 Worm   367 -AKVGFYRGDIRVLAEDIKELKPTVVPVVPRVLNRLYDK-VMSEVNKSTLKKMLFDFAISYKARD 429

  Fly   351 QTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIALG-- 413
            ...... ::...:.|.       |.|.|||..| ...|:..||.||.|..:..|   :..|:|  
 Worm   430 MANFNI-RNDGFFDNL-------VFKKIREGFG-GRVRLMITGSAPLSTNVLTF---VRAAMGCV 482

  Fly   414 --ECYGMSETSGAITLNVDISNLYS-AGQACEGVTLKIHE-PDCN-----GQGEILMRGRLVFMG 469
              |.||.:|...|.|::::..:|.. .|.......:|:.: |:.|     ..||:.::|.::|.|
 Worm   483 VVEGYGQTECVAACTVSMEGDSLAGHVGMVIPSCQIKLVDVPELNYYAKDQAGEVCVKGHIIFKG 547

  Fly   470 YLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIKKELPC 534
            |.....:|:||:.||||||:||:|...|:|.|.|..|.|.:...:.||.:.|..||.:..:. ..
 Worm   548 YYKNEQQTKETIDEDGWLHTGDIGRWTPEGTLKIVDRKKHIFKLSQGEYVAPEKIENIYVRS-KY 611

  Fly   535 VSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRDLDIHETRLSELLNIPADLQL 599
            |:...:.|:         |||| |.....:| ||  |..:..:.|..|..| ..||.|       
 Worm   612 VAQSFVHGE---------SLKT-CLIAIVVP-DA--EVLVPAMADQGIKGT-FEELCN------- 655

  Fly   600 PNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKFALIAHEFSVATGELGPTLKIR 664
             ||....|...::.|..|             |..:.:.::|:..:|.|.:|||....|.||||.:
 Worm   656 -NDAVKKAILDDMVAVGK-------------KAGLFSFEQVRDISLSAEQFSVENDLLTPTLKSK 706

  Fly   665 RNIVHAKYAKVIERLY 680
            |..:.|.|:|.::.:|
 Worm   707 RPKLKAHYSKQLDAMY 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 167/648 (26%)
acs-13NP_001293196.1 LC-FACS_euk 147..723 CDD:341250 172/659 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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