DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and Acsbg1

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_599216.1 Gene:Acsbg1 / 171410 RGDID:708557 Length:721 Species:Rattus norvegicus


Alignment Length:681 Identity:261/681 - (38%)
Similarity:389/681 - (57%) Gaps:54/681 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 STSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQ 76
            :|.....|:||| ||..   |..|.|:.:.|.|:.:||.:|.||.::.    .|.|..:::.:|.
  Rat    80 TTRADGRVRLRL-EPFC---TQLPYTVHQMFYEALDKYGNLSALGFKR----KDKWERISYYQYY 136

  Fly    77 ERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGE 141
            ....:.|...|.:|:|...||.||.||.|||||:..|.:.||.:|.|:|.::|.||..::.....
  Rat   137 LIARKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSSPEACQYIAHDCR 201

  Fly   142 SSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEP------GYFSWQKLQEQTFSSE 200
            ::|.|||..:|:.|:..|.:.||.||||:         :..||      ..::.::|.|  ...|
  Rat   202 ANVIVVDTQKQLEKILKIWKDLPHLKAVV---------IYQEPPPKKMANVYTMEELIE--LGQE 255

  Fly   201 LKEELL-ARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTK--SAAAHMQDIQVGKESFV 262
            :.||.| |.....:.|:|.:|::||||.|.||.||||.||:.:..:  |.|..:|..:|.:|..|
  Rat   256 VPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDIQPAEVQQEVVV 320

  Fly   263 SYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQERLVA 327
            |||||||:||||:|::.|:.....|.|||.|||||||:.|.|:..||...|||||:||:.||:..
  Rat   321 SYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALKGTLVNTLREVEPTSHMGVPRVWEKIMERIQE 385

  Fly   328 AEAKARPYSRLLLARARAAVAEHQTTLMAGK-SPSIYGNAKYWLACRVVKPIREMIGVDNCRVFF 391
            ..|::....|.:|..|.:...|...|..:.. .|.....|.|.:..||    |:.:|...|:..|
  Rat   386 VAAQSGFIRRKMLLWAMSVTLEQNLTCPSNDLKPFTSRLADYLVLARV----RQALGFAKCQKNF 446

  Fly   392 TGGAPTSEELKQFFLGLDIALGECYGMSETSGAITLNVDIS-NLYSAGQACEGVTLKIHEPDCNG 455
            .|.||.:.|.::|||||:|.|...||:||::|...::...: .|||:|:...|..:|:...|.:|
  Rat   447 YGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSGRVVPGCRVKLVNQDADG 511

  Fly   456 QGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIP 520
            .|||.:.||.:|||||.:.|||.|.:..:||||:||:|.:|..|.|.|:||||||||||||||:|
  Rat   512 IGEICLWGRTIFMGYLNMEDKTHEAIDSEGWLHTGDMGRLDDDGFLYITGRLKELIITAGGENVP 576

  Fly   521 PVHIEELIKKELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRDLDIHET 585
            ||.|||.:|.|||.:|:.:||||.||:|::||:||...:.:|..|.|.|.|:.:|:.:.:....:
  Rat   577 PVPIEEAVKMELPIISSAMLIGDQRKFLSMLLTLKCTLNPETSEPTDNLTEQAVEFCQRVGSKAS 641

  Fly   586 RLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKFALIAHEF 650
            .:||::.       ..|.|             :.:||.|||:|.|..|.:....:||:|::..:|
  Rat   642 TVSEIVG-------QKDEA-------------VYQAIHEGIQRVNANAAARPYHIQKWAILERDF 686

  Fly   651 SVATGELGPTLKIRRNIVHAKYAKVIERLYK 681
            |::.||||||:|::|..|..||..:|:..|:
  Rat   687 SISGGELGPTMKLKRLTVLEKYKDIIDSFYQ 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 243/628 (39%)
Acsbg1NP_599216.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
ACSBG_like 122..716 CDD:341256 243/632 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342857
Domainoid 1 1.000 382 1.000 Domainoid score I795
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 509 1.000 Inparanoid score I1269
OMA 1 1.010 - - QHG58630
OrthoDB 1 1.010 - - D218492at33208
OrthoFinder 1 1.000 - - FOG0003543
OrthoInspector 1 1.000 - - mtm9012
orthoMCL 1 0.900 - - OOG6_101481
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2420
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.810

Return to query results.
Submit another query.