DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and Acsl4

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_006257376.1 Gene:Acsl4 / 113976 RGDID:69401 Length:711 Species:Rattus norvegicus


Alignment Length:758 Identity:167/758 - (22%)
Similarity:318/758 - (41%) Gaps:185/758 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPATSYRSTSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPAL-------------- 55
            ||.:.|||.:..|::.: :|.|.:       .|:.:.|..:..|:....:|              
  Rat    54 KPGSPYRSVTHFDSLAV-IDIPGA-------DTLDKLFDHAVAKFGKKDSLGTREILSEENEMQP 110

  Fly    56 ---VWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRA 117
               |::....||..|  :.:.|...||......|.::|::.::::.|......||..|.....:.
  Rat   111 NGKVFKKLILGNYKW--INYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKY 173

  Fly   118 GAVVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDH 182
            ...:..:|.:...|||.|.|...|:|..:.......:||:|....:..:|.:|.:........::
  Rat   174 NFPLVTLYATLGKEAVVHGLNESEASYLITSVELLESKLKAALLDINCVKHIIYVDNKTINRAEY 238

  Fly   183 EPGYFSWQKLQEQTFSSELKEELLAR-------ESRIRANECAMLIFTSGTVGMPKAVMLSHDNL 240
            ..|.        :..|.:..|||.::       .||...::.|::::|||:.|.||.||:.|.||
  Rat   239 PEGL--------EIHSMQSVEELGSKPENSSIPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNL 295

  Fly   241 VFDTKSAAAHMQDIQVGKESFVSYLPLSHV---AAQI--FDVFLGLSHAGCVTFAD-----KDAL 295
            :.........:..:. .|::::.||||:||   .|:|  |.....:.::..:|.:|     |...
  Rat   296 IAGMTGQCERIPGLG-PKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGS 359

  Fly   296 KG--TLIKTFRKARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEHQTTLMAGK 358
            ||  |::|      ||.|..||.:.:::.:.::   :|.:..:.:           .:|....|.
  Rat   360 KGDCTVLK------PTLMAAVPEIMDRIYKNVM---SKVQEMNYI-----------QKTLFKIGY 404

  Fly   359 SPSIYGNAKYWLA--CRVV--KPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIA----LGEC 415
            ...:....|.:.|  |.::  |.::.::| .|.|:..:||||.|.:..:|   :::.    :|:.
  Rat   405 DYKLEQIKKGYDAPLCNLILFKKVKALLG-GNVRMMLSGGAPLSPQTHRF---MNVCFCCPIGQG 465

  Fly   416 YGMSETSGAITLNVDISNLYSAGQ------ACEGVTLK--------IHEPDCNGQGEILMRGRLV 466
            ||::|:.||.|: .:::: |:.|:      .|| :.||        :|:.. |.:|||::.|:.:
  Rat   466 YGLTESCGAGTV-TEVTD-YTTGRVGAPLICCE-IKLKDWQEGGYTVHDKP-NPRGEIVIGGQNI 526

  Fly   467 FMGYLGLPDKTEE--TVKEDG--WLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEEL 527
            .|||....:||.|  :|.|:|  |..:||:|...|.|.|.|..|.|:|:....||.:....:|..
  Rat   527 SMGYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAA 591

  Fly   528 IKKELPCVSNVL------------LIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIE--WLR 578
            : |..|.:.|:.            .:..::|.||:|                 .:::.:|  |: 
  Rat   592 L-KNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLL-----------------AQQKGVEGSWV- 637

  Fly   579 DLDIHETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKF 643
                      ::.|.||                  .:.::|:.|.|.         :||.|:::|
  Rat   638 ----------DICNNPA------------------MEAEILKEIREA---------ANAMKLERF 665

  Fly   644 ------ALIAHEFSVATGELGPTLKIRRNIVHAKYAKVIERLY 680
                  .|....::..||.:....|::|..:...|.|.|||:|
  Rat   666 EIPIKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLKDIERMY 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 153/682 (22%)
Acsl4XP_006257376.1 LC_FACS_euk1 121..696 CDD:341294 148/669 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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