DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and LOC100494473

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_031750896.1 Gene:LOC100494473 / 100494473 -ID:- Length:948 Species:Xenopus tropicalis


Alignment Length:532 Identity:163/532 - (30%)
Similarity:278/532 - (52%) Gaps:42/532 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKPATSYRSTSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSGNDGWT 68
            |.||.|..:.....||:||::...:.|:  ||.|:.:...|:..::....||.....    :.|.
 Frog   436 LAPAQSLWAVQRDGAVRLRMEPTGAGSE--PPLTVAQLMAEAVRRFGQQVALCVRKA----EEWH 494

  Fly    69 TLTFGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAV 133
            .:|:.:|:::....:..|:.||:.....|.||..|.||||.||.|::.||.:...:.|..:|..:
 Frog   495 RVTYLQYEQQCRAVSKGLIRVGLRRFHGVVILGKNSPEWFIAEIGSIMAGGLAVVIDPLCTASFL 559

  Fly   134 HHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQK---LQEQ 195
            ..|....|:.|.::.|.:|:.|:..::.:||::||::|..|..|:   ..|..::|::   |..:
 Frog   560 LDVAQNTEAQVILLQDHRQLRKVLQVQRKLPQVKAIVQWEGGKES---PHPRLYTWEELILLGME 621

  Fly   196 TFSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGKES 260
            ...|:| ::::|.:   :.|:|..:.:....   |:.||||||||.:.:::...|   :.:||..
 Frog   622 VPDSKL-DDVIASQ---KPNQCCSVFYAKDD---PRGVMLSHDNLTWVSQTTCKH---LSLGKHD 676

  Fly   261 FV-SYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQER 324
            .| |||||:.||||:||:::.|...|...||:.|||:.:|::|.|:.|||:..|.|..:||:|.|
 Frog   677 VVISYLPLNQVAAQLFDLWIPLCSGGTTYFAEADALRKSLLRTLREVRPTRFLGFPCFWEKIQTR 741

  Fly   325 LVAAEAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVV-KPIREMIGVDNCR 388
            .:..|.||:.:.|.::...|.....:.....||.:|  :|   :.||.|:| .|.|..:|:|.|.
 Frog   742 WMTLEEKAKLFPRKIMGWGRGVGLTNYQKEGAGAAP--WG---FSLAQRLVFHPARVALGLDRCS 801

  Fly   389 VFFTGGAPTSEELKQFFLGLDIALGECYGMSETSGAITLNVDISNLY---SAGQACEGVTLKIHE 450
            :.:.|..|.::...:::..|.:.|...||.:|:||..:|  .::|.:   |:|....|....|.|
 Frog   802 LCYVGTVPITQGTMEYYGSLGLTLLNVYGRNESSGVHSL--AMNNAWRTKSSGLEILGCRTHIKE 864

  Fly   451 PDCNG-QGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITA 514
            |...| .||:.:.||.|||||||:..:|:..:..:|||.:.|||..||.|.|.::.       ..
 Frog   865 PLRQGATGELCLWGRHVFMGYLGMEKETQAALDGEGWLLTSDLGTRDPSGFLYVTE-------WG 922

  Fly   515 GGENIPPVHIEE 526
            .|....||.:||
 Frog   923 AGPYERPVLLEE 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 148/474 (31%)
LOC100494473XP_031750896.1 PRK12582 409..>552 CDD:237144 34/121 (28%)
AFD_class_I 491..>919 CDD:418409 143/447 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D218492at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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