DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and zgc:158482

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001076488.1 Gene:zgc:158482 / 100009650 ZFINID:ZDB-GENE-070209-32 Length:619 Species:Danio rerio


Alignment Length:654 Identity:125/654 - (19%)
Similarity:216/654 - (33%) Gaps:191/654 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PQTIP-EFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLL-SVGVEERSSV 97
            |..:| :.|.:..|.....|.:|:|        ..|||:.:......:.|..|| ..|:....:.
Zfish    51 PVFLPVDRFLQQAEARPHKPFIVFE--------GQTLTYRDADRESNRIANALLRECGMRAGDTA 107

  Fly    98 GILAFNCPEWFFAEFGALRAGAVVAGVYPS--------------------NSAE---AVHHV-LA 138
            .:...|.|.:........:.|...|.:..|                    .||:   ||..| :.
Zfish   108 ALFITNQPAFILCWIALAKLGCACALLNTSIRDDSLIRSFRCCRGAKVLIASADLQAAVQQVCVP 172

  Fly   139 TGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKE 203
            ..:..|||:....:.:.:|::.                             :..||   ||:...
Zfish   173 LQQDGVCVLMMGMECSGMRSLS-----------------------------RAAQE---SSDTAV 205

  Fly   204 ELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGKESFVSY--LP 266
            ....| :.:..|..|:.|:||||.|:|||.:::...|:    ::.|.:..|.| ..:.|.|  ||
Zfish   206 PAAVR-AHLTNNTPAVYIYTSGTTGLPKAAVITQTRLL----ASLAVLPSIGV-THTDVLYVTLP 264

  Fly   267 LSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQERLVAAEAK 331
            |.|.|.     || :...|||.......|:             :.|...|.:::.:...|.....
Zfish   265 LYHTAG-----FL-IGFMGCVETGSSMVLR-------------RKFSASRFWDECRAHEVTVVQY 310

  Fly   332 ARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVFFTGGAP 396
            .....|.|....:.||.:|....:|      .||.   |...|.:...:..|             
Zfish   311 IGEILRYLCNTPQRAVDQHHAVRLA------IGNG---LRADVWREFLQRFG------------- 353

  Fly   397 TSEELKQFFLGLDIALGECYGMSETSGAITLNVDISNLYSAGQACEGVTLKIH-----------E 450
             ..|:::|:             :.|.|.|........|.:.|:......:.:|           |
Zfish   354 -QMEVREFY-------------ASTEGNIGFLNYTGRLGAVGRVSFLHRMAVHYALIQFDTEREE 404

  Fly   451 PDCNGQGEIL-----MRGRLV--------FMGYLGLPDKTEET------VKEDGWLHSGDLGYID 496
            |..:..|..:     ..|.||        |:||.....:||..      .:.|.:.:||||..:|
Zfish   405 PVRDSSGRCVEVPKGQTGLLVSQITHMAPFVGYAHDEQQTERKRLRDVFRRGDVYFNSGDLMRMD 469

  Fly   497 PKGNLIISGRLKELIITAGGENIPPVHIEELIKKELPCVSNVLLIG----DHRKYLTVLLSLKTK 557
            ....|....|:.: .....|||:....:.:::.. |.||:...:.|    .|             
Zfish   470 QDNFLYFIDRVGD-TFRWKGENVATTEVSDVLSL-LECVAEASVYGVCVPGH------------- 519

  Fly   558 CDAKTGIPLDALREETIEWLRDLDIHETRLSELLNIPADLQLPNDTAALAATLEITA-----KPK 617
             :.:.|:....|::......:.:..|.:||......|..|:       |.:::|:|:     |.|
Zfish   520 -EGRIGMAAVKLKDGAEFEQKQVFEHVSRLLPAYARPRFLR-------LQSSMELTSTFKQLKLK 576

  Fly   618 LLEA 621
            |:||
Zfish   577 LVEA 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 118/626 (19%)
zgc:158482NP_001076488.1 PRK08279 24..619 CDD:236217 125/654 (19%)
AFD_class_I 76..609 CDD:302604 118/621 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583205
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.