DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and SLITRK2

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_001137475.1 Gene:SLITRK2 / 84631 HGNCID:13449 Length:845 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
SLITRK2NP_001137475.1 LRR 1 63..84
leucine-rich repeat 67..87 CDD:275380
LRR_RI <82..>217 CDD:238064
LRR_8 86..146 CDD:290566
LRR 2 87..108
leucine-rich repeat 88..111 CDD:275380
LRR 3 111..132
leucine-rich repeat 112..135 CDD:275380
LRR_8 135..193 CDD:290566
LRR 4 135..156
leucine-rich repeat 136..159 CDD:275380
LRR 5 159..180
leucine-rich repeat 160..181 CDD:275380
Required for interaction with PTPRD. /evidence=ECO:0000250|UniProtKB:Q810C0 167..215
leucine-rich repeat 208..369 CDD:275380
TPKR_C2 216..>252 CDD:301599
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..321
leucine-rich repeat 370..400 CDD:275380
LRR 7 376..397
LRR_8 399..459 CDD:290566
LRR 8 400..421
leucine-rich repeat 401..424 CDD:275380
LRR_4 423..466 CDD:289563
LRR 9 424..445
leucine-rich repeat 425..448 CDD:275380
LRR 10 448..469
leucine-rich repeat 449..468 CDD:275380
LRR 11 472..493
leucine-rich repeat 473..491 CDD:275380
LRR 12 495..516
leucine-rich repeat 496..509 CDD:275378
leucine-rich repeat 521..533 CDD:275378
LRRCT 529..579 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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