DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and RLP1

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_001154318.1 Gene:RLP1 / 837251 AraportID:AT1G07390 Length:1083 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
RLP1NP_001154318.1 LRR_RI 76..>274 CDD:238064
leucine-rich repeat 84..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380
LRR_8 135..194 CDD:290566
leucine-rich repeat 137..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
LRR_8 209..270 CDD:290566
leucine-rich repeat 210..231 CDD:275380
LRR_RI 211..494 CDD:238064
leucine-rich repeat 232..259 CDD:275380
leucine-rich repeat 260..333 CDD:275380
leucine-rich repeat 334..359 CDD:275380
LRR_8 359..418 CDD:290566
leucine-rich repeat 360..382 CDD:275380
leucine-rich repeat 408..429 CDD:275380
leucine-rich repeat 433..455 CDD:275380
leucine-rich repeat 459..482 CDD:275380
leucine-rich repeat 483..507 CDD:275380
leucine-rich repeat 508..529 CDD:275380
leucine-rich repeat 530..554 CDD:275380
leucine-rich repeat 555..578 CDD:275380
leucine-rich repeat 579..603 CDD:275380
leucine-rich repeat 604..651 CDD:275380
LRR_RI <638..>810 CDD:238064
leucine-rich repeat 652..675 CDD:275380
leucine-rich repeat 676..721 CDD:275380
LRR_8 720..780 CDD:290566
leucine-rich repeat 722..745 CDD:275380
leucine-rich repeat 746..769 CDD:275380
leucine-rich repeat 770..791 CDD:275380
leucine-rich repeat 794..815 CDD:275380
leucine-rich repeat 883..909 CDD:275380
LRR_8 909..968 CDD:290566
leucine-rich repeat 910..933 CDD:275380
leucine-rich repeat 934..957 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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