DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and RLP56

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_001330457.1 Gene:RLP56 / 834989 AraportID:AT5G49290 Length:947 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
RLP56NP_001330457.1 LRRNT_2 31..75 CDD:311940
PLN00113 55..>868 CDD:331614
leucine-rich repeat 81..107 CDD:275380
leucine-rich repeat 108..136 CDD:275380
leucine-rich repeat 137..160 CDD:275380
leucine-rich repeat 161..185 CDD:275380
leucine-rich repeat 186..210 CDD:275380
leucine-rich repeat 211..235 CDD:275380
leucine-rich repeat 236..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..330 CDD:275380
leucine-rich repeat 335..382 CDD:275380
leucine-rich repeat 383..401 CDD:275380
leucine-rich repeat 408..429 CDD:275380
leucine-rich repeat 430..454 CDD:275380
leucine-rich repeat 455..478 CDD:275380
leucine-rich repeat 479..503 CDD:275380
leucine-rich repeat 504..527 CDD:275380
leucine-rich repeat 528..559 CDD:275380
leucine-rich repeat 576..595 CDD:275380
leucine-rich repeat 596..618 CDD:275380
leucine-rich repeat 619..641 CDD:275380
leucine-rich repeat 642..665 CDD:275380
leucine-rich repeat 666..705 CDD:275380
leucine-rich repeat 706..759 CDD:275380
leucine-rich repeat 760..783 CDD:275380
leucine-rich repeat 784..807 CDD:275380
leucine-rich repeat 808..831 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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