DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment rk and RLP55

DIOPT Version :9

Sequence 1:	NP_476702.1	Gene:	rk / 34819	FlyBaseID:	FBgn0003255	Length:	1360	Species:	Drosophila melanogaster
Sequence 2:	NP_199389.1	Gene:	RLP55 / 834616	AraportID:	AT5G45770	Length:	425	Species:	Arabidopsis thaliana

Alignment Length:	432	Identity:	101/432 - (23%)
Similarity:	154/432 - (35%)	Gaps:	163/432 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 PLLLQLLLQLLLLPPSAMGHDETKENPAPDMQNSQEQEPYVHLQHLQQQQQQNPQTVQQLSQITV 79
            ||||.|||.|||...|:                                ...||:.::.|..:
plant     9 PLLLLLLLPLLLTTVSS--------------------------------YPLNPKQLKALQSL-- 39

  Fly    80 NRTSKSASVTPTGIRENVMLPSADPEKEAQILYEKSLQEYHGSQLSTASTATDVIAGKRTLHSIC 144
                            |:..|:.||...            :.:|.|::|...|..:..|.:.||.
plant    40 ----------------NISTPTNDPCNN------------NNNQSSSSSITCDDASPYRHITSIS 76

  Fly   145 ERWLQKHCHCTGSL----------EVLRLSCRGIGILAVPVNLPNEV----VVLDLGNNNLTKLE 195
                ..:|..|.||          .::.||......|:.|.:||..:    .|.....||.|||
plant    77 ----FTNCSSTLSLPSKTLKPLSKSLISLSFTNCPSLSPPYHLPISLHSFSAVSSFLQNNRTKL- 136

  Fly   196 ANSFFMA--PNLEELTLSDNSIINMDPNAFY----GLAKLKRLSLQNCGLKSLPPQSFQGLAQLT 254
             :..|:|  .||:.|.:|...|  ......|    .:.||..|::.|..|..|.|:||.  :.|.
plant   137 -SGLFLARLKNLKTLYISSTPI--QTSRRLYVILGNMHKLTSLTISNSNLTGLIPKSFH--SNLR 196

  Fly   255 SLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDF 319
            .:.|:.|:                   |:|::  ||   ::..|:.|::|||..|.|:
plant   197 YIDLSNNS-------------------LKGSI--RI---SITRLKNLKSLNLSHNSLS------- 230

  Fly   320 PRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLIS-SLPEGLSKLSQLQELSITSNRLR 383
            .::||.|                 |:||.||.|.|..|.:| ::|..||.:|:|..|.::.|:|
plant   231 GQIPNKI-----------------KSLTFLKNLSLASNKLSGTIPNSLSSISELTHLDLSMNQL- 277

  Fly   384 WINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSD 425
              |.|                   .|..|..|..|:.|.|:|
plant   278 --NGT-------------------VPSFFSEMKNLKHLNLAD 298

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rk	NP_476702.1	leucine-rich repeat	158..179	CDD:275380	6/30 (20%)
		LRR_RI	180..>383	CDD:238064	56/213 (26%)
		leucine-rich repeat	183..204	CDD:275380	8/22 (36%)
		LRR_8	203..263	CDD:290566	18/63 (29%)
		leucine-rich repeat	205..228	CDD:275380	5/26 (19%)
		leucine-rich repeat	229..252	CDD:275380	8/22 (36%)
		LRR_8	252..311	CDD:290566	13/58 (22%)
		leucine-rich repeat	253..276	CDD:275380	3/22 (14%)
		leucine-rich repeat	277..300	CDD:275380	5/22 (23%)
		LRR_8	299..359	CDD:290566	17/59 (29%)
		leucine-rich repeat	301..324	CDD:275380	6/22 (27%)
		leucine-rich repeat	325..348	CDD:275380	3/22 (14%)
		LRR_RI	327..567	CDD:238064	26/100 (26%)
		leucine-rich repeat	349..371	CDD:275380	9/22 (41%)
		LRR_8	370..425	CDD:290566	13/54 (24%)
		leucine-rich repeat	372..393	CDD:275380	6/20 (30%)
		leucine-rich repeat	394..415	CDD:275380	2/20 (10%)
		leucine-rich repeat	418..486	CDD:275380	4/8 (50%)
		leucine-rich repeat	441..464	CDD:275378
		LRR_8	487..545	CDD:290566
		leucine-rich repeat	487..510	CDD:275380
		leucine-rich repeat	511..534	CDD:275380
		LRR_8	533..589	CDD:290566
		leucine-rich repeat	535..558	CDD:275380
		leucine-rich repeat	559..580	CDD:275380
		7tm_4	764..>892	CDD:304433
		7tm_1	770..1017	CDD:278431
RLP55	NP_199389.1	LRR_8	145..205	CDD:290566	18/82 (22%)
		leucine-rich repeat	147..172	CDD:275380	5/26 (19%)
		LRR_RI	<167..>300	CDD:238064	52/204 (25%)
		leucine-rich repeat	173..194	CDD:275380	8/22 (36%)
		LRR_8	193..253	CDD:290566	25/107 (23%)
		leucine-rich repeat	195..218	CDD:275380	8/46 (17%)
		leucine-rich repeat	219..242	CDD:275380	11/46 (24%)
		LRR_8	243..301	CDD:290566	23/78 (29%)
		leucine-rich repeat	243..266	CDD:275380	9/22 (41%)
		leucine-rich repeat	267..290	CDD:275380	9/44 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910