DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and GSO2

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_199283.1 Gene:GSO2 / 834499 AraportID:AT5G44700 Length:1252 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
GSO2NP_199283.1 LRRNT_2 28..68 CDD:285463
leucine-rich repeat 76..96 CDD:275380
LRR_RI 135..406 CDD:238064
LRR_8 145..204 CDD:290566
leucine-rich repeat 146..169 CDD:275380
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..241 CDD:275380
LRR_8 240..300 CDD:290566
leucine-rich repeat 242..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
PLN00113 285..1232 CDD:215061
leucine-rich repeat 290..313 CDD:275380
leucine-rich repeat 314..338 CDD:275380
leucine-rich repeat 339..362 CDD:275380
leucine-rich repeat 363..386 CDD:275380
leucine-rich repeat 387..410 CDD:275380
leucine-rich repeat 411..434 CDD:275380
leucine-rich repeat 435..458 CDD:275380
leucine-rich repeat 459..482 CDD:275380
leucine-rich repeat 483..506 CDD:275380
leucine-rich repeat 507..528 CDD:275380
leucine-rich repeat 531..554 CDD:275380
leucine-rich repeat 555..571 CDD:275380
LRR_RI 603..843 CDD:238064
leucine-rich repeat 604..625 CDD:275380
leucine-rich repeat 626..649 CDD:275380
leucine-rich repeat 650..673 CDD:275380
leucine-rich repeat 674..697 CDD:275380
leucine-rich repeat 698..721 CDD:275380
leucine-rich repeat 722..745 CDD:275380
leucine-rich repeat 746..769 CDD:275380
leucine-rich repeat 770..794 CDD:275380
leucine-rich repeat 795..818 CDD:275380
leucine-rich repeat 819..839 CDD:275380
STKc_IRAK 954..1232 CDD:270968
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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