DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and RLP19

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_179112.1 Gene:RLP19 / 815997 AraportID:AT2G15080 Length:983 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
RLP19NP_179112.1 PLN00113 3..>646 CDD:331614
leucine-rich repeat 114..137 CDD:275380
leucine-rich repeat 138..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..305 CDD:275380
leucine-rich repeat 306..329 CDD:275380
leucine-rich repeat 330..351 CDD:275380
leucine-rich repeat 354..377 CDD:275380
leucine-rich repeat 378..402 CDD:275380
leucine-rich repeat 403..424 CDD:275380
leucine-rich repeat 427..451 CDD:275380
leucine-rich repeat 452..477 CDD:275380
leucine-rich repeat 507..526 CDD:275380
leucine-rich repeat 527..550 CDD:275380
leucine-rich repeat 551..574 CDD:275380
leucine-rich repeat 575..604 CDD:275380
PLN00113 <604..692 CDD:331614
leucine-rich repeat 605..630 CDD:275380
leucine-rich repeat 631..655 CDD:275380
PLN00113 <656..739 CDD:331614
leucine-rich repeat 656..676 CDD:275380
leucine-rich repeat 677..700 CDD:275380
leucine-rich repeat 701..722 CDD:275380
leucine-rich repeat 723..795 CDD:275380
leucine-rich repeat 796..819 CDD:275380
PLN00113 <808..962 CDD:331614
leucine-rich repeat 820..843 CDD:275380
leucine-rich repeat 844..867 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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