| Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_110483.2 | Gene: | Lrrn3 / 81514 | RGDID: | 71066 | Length: | 707 | Species: | Rattus norvegicus |
| Alignment Length: | 594 | Identity: | 139/594 - (23%) |
|---|---|---|---|
| Similarity: | 227/594 - (38%) | Gaps: | 166/594 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 158 LEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNA 222
Fly 223 FYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLF 287
Fly 288 YRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVL 352
Fly 353 ELDDNLISSLP-EGLSKLSQLQELSITSNRLRWINDTELPR--SMQMLDMRANPLSTISPGAFRG 414
Fly 415 MSKLRKLILSDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIP 479
Fly 480 NLSSCRDLRLLDLSSN-QIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGN 543
Fly 544 EISYIHKEAFSGFTALEDLNLGNNIFPELPESGLRALLHLKTFNNPKLREFPPPDTF----PRIQ 604
Fly 605 TLILSYAY-----HCCAFLPLVAMSSQKKTSQVQEAVLFPS--DAEFD--MTLWNNSMMNIWPQM 660
Fly 661 HNLSKQLGASMHDPWETAINFNEEQLQTQTGGQIATSYMEEYFEEH-----DVSG--PATGYGFG 718
Fly 719 TGLFSGMST 727 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 7/20 (35%) |
| LRR_RI | 180..>383 | CDD:238064 | 60/203 (30%) | ||
| leucine-rich repeat | 183..204 | CDD:275380 | 6/20 (30%) | ||
| LRR_8 | 203..263 | CDD:290566 | 14/59 (24%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 3/22 (14%) | ||
| LRR_8 | 252..311 | CDD:290566 | 23/58 (40%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 299..359 | CDD:290566 | 20/59 (34%) | ||
| leucine-rich repeat | 301..324 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 325..348 | CDD:275380 | 7/22 (32%) | ||
| LRR_RI | 327..567 | CDD:238064 | 53/243 (22%) | ||
| leucine-rich repeat | 349..371 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 370..425 | CDD:290566 | 16/56 (29%) | ||
| leucine-rich repeat | 372..393 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 394..415 | CDD:275380 | 7/20 (35%) | ||
| leucine-rich repeat | 418..486 | CDD:275380 | 7/67 (10%) | ||
| leucine-rich repeat | 441..464 | CDD:275378 | 2/22 (9%) | ||
| LRR_8 | 487..545 | CDD:290566 | 14/58 (24%) | ||
| leucine-rich repeat | 487..510 | CDD:275380 | 6/23 (26%) | ||
| leucine-rich repeat | 511..534 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 533..589 | CDD:290566 | 9/55 (16%) | ||
| leucine-rich repeat | 535..558 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 559..580 | CDD:275380 | 1/20 (5%) | ||
| 7tm_4 | 764..>892 | CDD:304433 | |||
| 7tm_1 | 770..1017 | CDD:278431 | |||
| Lrrn3 | NP_110483.2 | LRRNT | 28..72 | CDD:214470 | 8/23 (35%) |
| LRR 1 | 70..91 | 5/20 (25%) | |||
| LRR | <72..355 | CDD:227223 | 90/351 (26%) | ||
| leucine-rich repeat | 72..93 | CDD:275380 | 6/21 (29%) | ||
| LRR 2 | 93..114 | 8/44 (18%) | |||
| leucine-rich repeat | 94..117 | CDD:275380 | 8/46 (17%) | ||
| LRR 3 | 117..138 | 9/20 (45%) | |||
| leucine-rich repeat | 118..141 | CDD:275380 | 9/22 (41%) | ||
| LRR 4 | 141..162 | 6/20 (30%) | |||
| leucine-rich repeat | 142..165 | CDD:275380 | 8/22 (36%) | ||
| LRR 5 | 165..186 | 9/20 (45%) | |||
| leucine-rich repeat | 166..189 | CDD:275380 | 9/22 (41%) | ||
| LRR 6 | 189..210 | 7/20 (35%) | |||
| leucine-rich repeat | 190..213 | CDD:275380 | 7/22 (32%) | ||
| LRR 7 | 213..234 | 4/20 (20%) | |||
| leucine-rich repeat | 214..237 | CDD:275380 | 5/22 (23%) | ||
| LRR 8 | 237..258 | 6/20 (30%) | |||
| leucine-rich repeat | 238..261 | CDD:275380 | 6/22 (27%) | ||
| LRR 9 | 261..282 | 7/20 (35%) | |||
| leucine-rich repeat | 262..285 | CDD:275380 | 8/22 (36%) | ||
| LRR 10 | 285..304 | 6/32 (19%) | |||
| leucine-rich repeat | 286..310 | CDD:275380 | 7/67 (10%) | ||
| LRR 11 | 310..332 | 6/21 (29%) | |||
| leucine-rich repeat | 311..333 | CDD:275380 | 5/21 (24%) | ||
| LRR 12 | 335..358 | 6/22 (27%) | |||
| leucine-rich repeat | 336..359 | CDD:275378 | 6/22 (27%) | ||
| PCC | 341..>405 | CDD:188093 | 18/93 (19%) | ||
| leucine-rich repeat | 360..372 | CDD:275378 | 6/19 (32%) | ||
| Ig | 440..513 | CDD:416386 | 15/89 (17%) | ||
| Ig strand B | 440..447 | CDD:409353 | 1/6 (17%) | ||
| Ig strand C | 453..458 | CDD:409353 | 1/28 (4%) | ||
| Ig strand C' | 461..464 | CDD:409353 | 1/2 (50%) | ||
| Ig strand D | 470..474 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 479..483 | CDD:409353 | 0/3 (0%) | ||
| Ig strand F | 493..500 | CDD:409353 | 2/7 (29%) | ||
| Ig strand G | 503..513 | CDD:409353 | |||
| fn3 | 526..593 | CDD:394996 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||