DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and Igfals

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_445781.3 Gene:Igfals / 79438 RGDID:68429 Length:603 Species:Rattus norvegicus


Alignment Length:546 Identity:150/546 - (27%)
Similarity:230/546 - (42%) Gaps:80/546 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SADPEKEAQILYEKSLQEYHGSQLSTASTATDVIAGKRTLHSICERWLQKHCHCTGSLEVLRLSC 165
            |:.|....|.|.........||.|  .|.....:.|.:.|:         |.|    ||..||..
  Rat    87 SSIPSAAFQNLSSLDFLNLQGSWL--RSLEPQALLGLQNLY---------HLH----LERNRLRN 136

  Fly   166 RGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLK 230
            ..:|:.....:|.:    |.|.:|.|.:||...|....:|.:|.|..||::.:....|.||..|.
  Rat   137 LAVGLFTHTPSLAS----LSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLH 197

  Fly   231 RLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNAL 295
            .|.|....|..|.|..|.||.:|..|.|:.|||.|:..:...||.:|:.|.|:.||...:...|.
  Rat   198 ELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAF 262

  Fly   296 AGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLIS 360
            .|::.|..|:|..|.:..:.::.||                        .|..|.||.|..|.|:
  Rat   263 LGMKALRWLDLSHNRVAGLMEDTFP------------------------GLLGLHVLRLAHNAIA 303

  Fly   361 SL-PEGLSKLSQLQELSITSNRLRWINDT--ELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLI 422
            || |.....|..|:||.:..||:|.:.:.  |....:::|.:..|.::.:..|||.|:..:..:.
  Rat   304 SLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMN 368

  Fly   423 LSDVRTLRSFPE-----LEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRI--PN 480
            ||. ..|||.||     |:..|:|.   |:.:.:..|..:.......|:.|.|:.||:..|  .:
  Rat   369 LSG-NCLRSLPERVFQGLDKLHSLH---LEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQS 429

  Fly   481 LSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEI 545
            |:...:|..|||::|::..:..:.|.||..|..||||||::..|..:....:.:...||:..|.:
  Rat   430 LAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHL 494

  Fly   546 SYIHKEAFSGFTALEDLNLGNNIFPEL-PESGLRALLHLKTFNNP--------KLREF--PPPDT 599
            ..:.:..||....|..|:|.||..... |:.||.   .|....||        .||:|  ..|..
  Rat   495 ETLAEGLFSSLGRLRYLSLRNNSLQTFSPQPGLE---RLWLDANPWDCSCPLKALRDFALQNPGV 556

  Fly   600 FPR-IQTL--------ILSYAYHCCA 616
            .|| :||:        :.:|....||
  Rat   557 VPRFVQTVCEGDDCQPVYTYNNITCA 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380 6/20 (30%)
LRR_RI 180..>383 CDD:238064 62/203 (31%)
leucine-rich repeat 183..204 CDD:275380 7/20 (35%)
LRR_8 203..263 CDD:290566 21/59 (36%)
leucine-rich repeat 205..228 CDD:275380 8/22 (36%)
leucine-rich repeat 229..252 CDD:275380 9/22 (41%)
LRR_8 252..311 CDD:290566 20/58 (34%)
leucine-rich repeat 253..276 CDD:275380 9/22 (41%)
leucine-rich repeat 277..300 CDD:275380 7/22 (32%)
LRR_8 299..359 CDD:290566 12/59 (20%)
leucine-rich repeat 301..324 CDD:275380 6/22 (27%)
leucine-rich repeat 325..348 CDD:275380 1/22 (5%)
LRR_RI 327..567 CDD:238064 67/249 (27%)
leucine-rich repeat 349..371 CDD:275380 10/22 (45%)
LRR_8 370..425 CDD:290566 14/56 (25%)
leucine-rich repeat 372..393 CDD:275380 7/22 (32%)
leucine-rich repeat 394..415 CDD:275380 5/20 (25%)
leucine-rich repeat 418..486 CDD:275380 19/74 (26%)
leucine-rich repeat 441..464 CDD:275378 3/22 (14%)
LRR_8 487..545 CDD:290566 19/57 (33%)
leucine-rich repeat 487..510 CDD:275380 8/22 (36%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
LRR_8 533..589 CDD:290566 14/56 (25%)
leucine-rich repeat 535..558 CDD:275380 5/22 (23%)
leucine-rich repeat 559..580 CDD:275380 8/21 (38%)
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
IgfalsNP_445781.3 LRRNT 40..78 CDD:214470
leucine-rich repeat 57..75 CDD:275380
PLN00113 68..>494 CDD:215061 126/453 (28%)
LRR 1 75..96 2/8 (25%)
leucine-rich repeat 79..99 CDD:275380 4/11 (36%)
LRR 2 99..120 4/22 (18%)
leucine-rich repeat 103..123 CDD:275380 5/21 (24%)
LRR 3 123..144 8/33 (24%)
LRR 4 147..168 8/24 (33%)
LRR 5 171..192 6/20 (30%)
leucine-rich repeat 175..195 CDD:275380 7/19 (37%)
LRR 6 195..216 7/20 (35%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
LRR 7 219..240 7/20 (35%)
leucine-rich repeat 220..243 CDD:275380 9/22 (41%)
LRR 8 243..264 6/20 (30%)
leucine-rich repeat 244..267 CDD:275380 7/22 (32%)
LRR 9 267..288 6/44 (14%)
leucine-rich repeat 268..291 CDD:275380 7/46 (15%)
LRR 10 291..312 9/20 (45%)
leucine-rich repeat 292..315 CDD:275380 10/22 (45%)
LRR 11 315..336 6/20 (30%)
leucine-rich repeat 316..339 CDD:275380 7/22 (32%)
LRR 12 339..360 5/20 (25%)
leucine-rich repeat 340..363 CDD:275380 6/22 (27%)
LRR 13 363..384 7/21 (33%)
leucine-rich repeat 364..387 CDD:275380 8/23 (35%)
LRR 14 387..408 4/23 (17%)
leucine-rich repeat 388..411 CDD:275380 4/25 (16%)
LRR 15 411..432 7/20 (35%)
leucine-rich repeat 412..435 CDD:275380 7/22 (32%)
LRR 16 435..456 6/20 (30%)
leucine-rich repeat 436..459 CDD:275380 8/22 (36%)
LRR 17 459..480 8/20 (40%)
leucine-rich repeat 460..481 CDD:275380 8/20 (40%)
LRR 18 483..504 4/20 (20%)
leucine-rich repeat 484..507 CDD:275380 5/22 (23%)
LRR_8 486..536 CDD:404697 14/52 (27%)
LRR 19 507..528 7/20 (35%)
TPKR_C2 535..578 CDD:417692 11/42 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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