Protein Alignment rk and opn6a

DIOPT Version :9

• Sequence 1: NP_476702.1
• Gene: rk / 34819
• FlyBaseID: FBgn0003255
• Length: 1360
• Species: Drosophila melanogaster
• Sequence 2: NP_001073125.1
• Gene: opn6a / 780836
• ZFINID: ZDB-GENE-061201-30
• Length: 419
• Species: Danio rerio
• Alignment Length: 356
• Identity: 94/356 - (26%)
• Similarity: 149/356 - (41%)
• Gaps: 78/356 - (21%)

  Fly   759 GVWVVFL--LSLLGNGTVVFVLLCSRSKMDVPRFLVCNLAAADFFMGIY---LGILAIVDAATLG 818
            ||:::.|  ||..||..|:|||...||.:....:|..|||.:|..:.::   .|||.|
Zfish    37 GVYLLILGWLSWFGNSIVIFVLFRQRSTLQPTDYLTLNLAVSDASISVFGYSRGILEI------- 94

  Fly   819 EFRMF-------AIPWQMSVLCQLSGFLAVLSSELSVYTLAVITLERNYAITHAIHLNKRLSLKQ 876
             |.:|       :..|    .||:.||..::....|:.||.||::.|   .....|.:|...:..
Zfish    95 -FNIFKDSGYIISSVW----TCQVDGFFTLVFGLSSINTLTVISITR---FIKGCHPHKAHCITN 151

  Fly   877 AGYIMSVG--WVFALIMALMPLVGVSDY--RKFAVCLPFETTTGPASL-----TYVISL-MFING 931
            :...:.|.  |:.|...:..|::|...|  |.:..|   |.....|:.     :|:||: :|...
Zfish   152 STVAVCVVFIWIGAFFWSAAPVLGWGSYTDRGYGTC---EIDWVKANYSTIHKSYIISIFIFCFL 213

  Fly   932 CAFLTLMGCYLKMYWAIRGSQAWNTNDSRIAKR----------MALLVFTDF-LCWSPIAFFSIT 985
            ...|.::.||:.:...::...|.|. |..::.|          :::::.|.| |.|||.|..|:.
Zfish   214 VPVLLMLFCYISIINTVKRGNAMNA-DGDLSDRQRKIERDVTIVSIVICTAFILAWSPYAVVSMW 277

  Fly   986 AIFGLQLISLEQAKIFTVFVLPLNSCCNPFLYAIMTKQFKKDCVTL--CKHFEESRVVGGGGPGG 1048
            :.:|..:.:|  ..|||.......|..||.:|..::.:|:||...|  |            |..|
Zfish   278 SAWGFHVPNL--TSIFTRLFAKSASFYNPLIYFGLSSKFRKDVSVLLPC------------GREG 328

  Fly  1049 RGAVARTK-----RGDLPPPLLPAAAVAHPP 1074
            |..| |.|     ||...||    .|.||.|
Zfish   329 RDPV-RLKRFKRLRGRAEPP----GAPAHTP 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rk	NP_476702.1	leucine-rich repeat	158..179	CDD:275380
		LRR_RI	180..>383	CDD:238064
		leucine-rich repeat	183..204	CDD:275380
		LRR_8	203..263	CDD:290566
		leucine-rich repeat	205..228	CDD:275380
		leucine-rich repeat	229..252	CDD:275380
		LRR_8	252..311	CDD:290566
		leucine-rich repeat	253..276	CDD:275380
		leucine-rich repeat	277..300	CDD:275380
		LRR_8	299..359	CDD:290566
		leucine-rich repeat	301..324	CDD:275380
		leucine-rich repeat	325..348	CDD:275380
		LRR_RI	327..567	CDD:238064
		leucine-rich repeat	349..371	CDD:275380
		LRR_8	370..425	CDD:290566
		leucine-rich repeat	372..393	CDD:275380
		leucine-rich repeat	394..415	CDD:275380
		leucine-rich repeat	418..486	CDD:275380
		leucine-rich repeat	441..464	CDD:275378
		LRR_8	487..545	CDD:290566
		leucine-rich repeat	487..510	CDD:275380
		leucine-rich repeat	511..534	CDD:275380
		LRR_8	533..589	CDD:290566
		leucine-rich repeat	535..558	CDD:275380
		leucine-rich repeat	559..580	CDD:275380
		7tm_4	764..>892	CDD:304433	38/141 (27%)
		7tm_1	770..1017	CDD:278431	69/277 (25%)
opn6a	NP_001073125.1	7tm_1	50..307	CDD:278431	69/277 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910