Protein Alignment rk and TLR4

DIOPT Version :9

• Sequence 1: NP_476702.1
• Gene: rk / 34819
• FlyBaseID: FBgn0003255
• Length: 1360
• Species: Drosophila melanogaster
• Sequence 2: NP_612564.1
• Gene: TLR4 / 7099
• HGNCID: 11850
• Length: 839
• Species: Homo sapiens
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rk	NP_476702.1	leucine-rich repeat	158..179	CDD:275380
		LRR_RI	180..>383	CDD:238064
		leucine-rich repeat	183..204	CDD:275380
		LRR_8	203..263	CDD:290566
		leucine-rich repeat	205..228	CDD:275380
		leucine-rich repeat	229..252	CDD:275380
		LRR_8	252..311	CDD:290566
		leucine-rich repeat	253..276	CDD:275380
		leucine-rich repeat	277..300	CDD:275380
		LRR_8	299..359	CDD:290566
		leucine-rich repeat	301..324	CDD:275380
		leucine-rich repeat	325..348	CDD:275380
		LRR_RI	327..567	CDD:238064
		leucine-rich repeat	349..371	CDD:275380
		LRR_8	370..425	CDD:290566
		leucine-rich repeat	372..393	CDD:275380
		leucine-rich repeat	394..415	CDD:275380
		leucine-rich repeat	418..486	CDD:275380
		leucine-rich repeat	441..464	CDD:275378
		LRR_8	487..545	CDD:290566
		leucine-rich repeat	487..510	CDD:275380
		leucine-rich repeat	511..534	CDD:275380
		LRR_8	533..589	CDD:290566
		leucine-rich repeat	535..558	CDD:275380
		leucine-rich repeat	559..580	CDD:275380
		7tm_4	764..>892	CDD:304433
		7tm_1	770..1017	CDD:278431
TLR4	NP_612564.1	LRR_RI	55..>195	CDD:238064
		LRR 1	55..76
		leucine-rich repeat	56..79	CDD:275378
		LRR_8	57..114	CDD:290566
		LRR 2	79..100
		leucine-rich repeat	80..103	CDD:275378
		LRR_8	102..187	CDD:290566
		LRR 3	103..124
		leucine-rich repeat	104..127	CDD:275378
		LRR 4	127..148
		leucine-rich repeat	128..176	CDD:275378
		leucine-rich repeat	130..151	CDD:275380
		LRR 5	151..172
		LRR_RI	152..456	CDD:238064
		LRR 6	176..199
		leucine-rich repeat	177..190	CDD:275378
		leucine-rich repeat	195..224	CDD:275380
		LRR 7	205..225
		LRR 8	227..247
		LRR 9	331..351
		LRR 10	352..373
		leucine-rich repeat	353..374	CDD:275380
		LRR_RI	<372..581	CDD:238064
		LRR 11	374..394
		LRR_8	399..458	CDD:290566
		LRR 12	400..422
		leucine-rich repeat	401..423	CDD:275380
		LRR 13	423..444
		leucine-rich repeat	424..448	CDD:275380
		LRR_8	447..508	CDD:290566
		LRR 14	448..456
		leucine-rich repeat	449..472	CDD:275380
		LRR 15	472..495
		leucine-rich repeat	473..497	CDD:275380
		LRR 16	497..518
		leucine-rich repeat	498..521	CDD:275380
		LRR_8	520..581	CDD:290566
		LRR 17	521..542
		LRR 18	545..565
		leucine-rich repeat	546..570	CDD:275380
		LRRCT	579..625	CDD:214507
		TIR	674..815	CDD:214587

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910