DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and TLR2

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_001305716.1 Gene:TLR2 / 7097 HGNCID:11848 Length:784 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
TLR2NP_001305716.1 PLN00113 <40..>206 CDD:331614
leucine-rich repeat 54..77 CDD:275380
LRR 1 54..77
LRR_8 77..135 CDD:316378
leucine-rich repeat 78..101 CDD:275380
LRR 2 78..101
leucine-rich repeat 102..125 CDD:275380
LRR 3 102..125
leucine-rich repeat 126..150 CDD:275380
LRR 4 126..150
leucine-rich repeat 151..175 CDD:275380
LRR 5 151..175
LRR 6 176..199
leucine-rich repeat 176..196 CDD:275380
LRR 7 200..223
LRR 8 224..250
LRR 9 251..278
LRR 10 279..308
LRR 11 309..337
NEL <324..>558 CDD:330839
LRR 12 338..361
leucine-rich repeat 362..388 CDD:275380
LRR 13 362..388
leucine-rich repeat 389..414 CDD:275380
LRR 14 389..414
leucine-rich repeat 415..437 CDD:275380
LRR 15 415..437
leucine-rich repeat 438..478 CDD:275380
LRR 16 438..457
LRR 17 458..478
leucine-rich repeat 479..500 CDD:275380
LRR 18 479..500
leucine-rich repeat 501..524 CDD:275380
LRR 19 501..524
LRRCT 533..586 CDD:214507
TIR 640..784 CDD:214587
ATG16L1-binding motif 761..778
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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