| Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001032413.1 | Gene: | Lrrc4 / 641521 | RGDID: | 1560026 | Length: | 652 | Species: | Rattus norvegicus |
| Alignment Length: | 737 | Identity: | 164/737 - (22%) |
|---|---|---|---|
| Similarity: | 270/737 - (36%) | Gaps: | 209/737 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 74 LSQITVNRTSKSASVTPTGIRENVMLPSADPEKEAQILYEKSLQEYHGSQLSTASTATDVIAGKR 138
Fly 139 TLHSICERWLQKHCHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAP 203
Fly 204 NLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGN------- 261
Fly 262 -------ALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDF 319
Fly 320 PRMPNLI---VLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLP-EGLSKLSQLQELSITSN 380
Fly 381 RLRWI-NDTELP-RSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPELEA-----C 438
Fly 439 HA------LEILKLDRAGIQ-------EVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDL--- 487
Fly 488 -RLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNE--ISYIH 549
Fly 550 KEA-------FSGFTAL---------EDLNLGNNIFPEL-----PESGLRALLHLKTFNNPKLRE 593
Fly 594 FPPPDTFPRIQT------------------LILSYAYHCCAFLPLVAMSSQKKT---------SQ 631
Fly 632 VQE---------------------AVLFPSDAEFDMTLWNNSMMNIWPQMHN---LSKQLGASMH 672
Fly 673 DPWETAINFNEEQLQTQTGGQI 694 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 4/20 (20%) |
| LRR_RI | 180..>383 | CDD:238064 | 64/220 (29%) | ||
| leucine-rich repeat | 183..204 | CDD:275380 | 6/20 (30%) | ||
| LRR_8 | 203..263 | CDD:290566 | 22/73 (30%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 252..311 | CDD:290566 | 22/72 (31%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 10/36 (28%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 299..359 | CDD:290566 | 17/62 (27%) | ||
| leucine-rich repeat | 301..324 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 325..348 | CDD:275380 | 6/25 (24%) | ||
| LRR_RI | 327..567 | CDD:238064 | 57/282 (20%) | ||
| leucine-rich repeat | 349..371 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 370..425 | CDD:290566 | 13/56 (23%) | ||
| leucine-rich repeat | 372..393 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 394..415 | CDD:275380 | 3/20 (15%) | ||
| leucine-rich repeat | 418..486 | CDD:275380 | 18/85 (21%) | ||
| leucine-rich repeat | 441..464 | CDD:275378 | 5/29 (17%) | ||
| LRR_8 | 487..545 | CDD:290566 | 11/63 (17%) | ||
| leucine-rich repeat | 487..510 | CDD:275380 | 3/26 (12%) | ||
| leucine-rich repeat | 511..534 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 533..589 | CDD:290566 | 12/78 (15%) | ||
| leucine-rich repeat | 535..558 | CDD:275380 | 6/31 (19%) | ||
| leucine-rich repeat | 559..580 | CDD:275380 | 4/34 (12%) | ||
| 7tm_4 | 764..>892 | CDD:304433 | |||
| 7tm_1 | 770..1017 | CDD:278431 | |||
| Lrrc4 | NP_001032413.1 | LRRNT | 45..78 | CDD:214470 | 8/42 (19%) |
| LRR_8 | 74..132 | CDD:404697 | 20/57 (35%) | ||
| LRR 1 | 75..96 | 6/20 (30%) | |||
| leucine-rich repeat | 76..99 | CDD:275380 | 6/22 (27%) | ||
| PPP1R42 | 96..300 | CDD:411060 | 63/221 (29%) | ||
| LRR 2 | 99..120 | 8/20 (40%) | |||
| leucine-rich repeat | 100..123 | CDD:275380 | 10/22 (45%) | ||
| LRR 3 | 123..144 | 6/20 (30%) | |||
| leucine-rich repeat | 124..147 | CDD:275380 | 7/22 (32%) | ||
| LRR 4 | 147..168 | 4/20 (20%) | |||
| leucine-rich repeat | 148..171 | CDD:275380 | 4/22 (18%) | ||
| LRR 5 | 171..193 | 11/34 (32%) | |||
| leucine-rich repeat | 172..196 | CDD:275380 | 13/36 (36%) | ||
| LRR 6 | 196..217 | 8/25 (32%) | |||
| leucine-rich repeat | 197..218 | CDD:275380 | 9/25 (36%) | ||
| LRR 7 | 218..239 | 4/20 (20%) | |||
| leucine-rich repeat | 219..242 | CDD:275380 | 5/22 (23%) | ||
| LRR 8 | 242..263 | 4/20 (20%) | |||
| leucine-rich repeat | 243..266 | CDD:275380 | 5/22 (23%) | ||
| LRR 9 | 266..287 | 6/20 (30%) | |||
| leucine-rich repeat | 267..288 | CDD:275380 | 6/20 (30%) | ||
| LRRCT | 299..350 | CDD:214507 | 12/62 (19%) | ||
| IG_like | 358..440 | CDD:214653 | 20/100 (20%) | ||
| Ig strand B | 369..373 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 380..384 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 406..410 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 420..425 | CDD:409353 | 0/4 (0%) | ||
| Ig strand G | 433..436 | CDD:409353 | 0/2 (0%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||