DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and AgaP_AGAP008171

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_001689016.1 Gene:AgaP_AGAP008171 / 5668341 VectorBaseID:AGAP008171 Length:680 Species:Anopheles gambiae


Alignment Length:586 Identity:135/586 - (23%)
Similarity:236/586 - (40%) Gaps:135/586 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 LDLGNNNLTKLEANSFFMA----PNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKSLPP 244
            :||..|.|..|..:|...|    |.|.:|.|.:|.:.:::.:.|..:..|.|:.|.:..:..:..
Mosquito   104 IDLSKNRLHTLYDSSAGTATLSYPLLADLYLRENKLKHINLDVFRPMESLTRIDLSHNQISVVSG 168

  Fly   245 QSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSN 309
            ....  |.|..|.|:.|.:|.:  ||.|               :.:|.     |..::|      
Mosquito   169 SLVS--ASLNLLDLSNNRIVEM--DCCG---------------WAVPM-----LYGMDA------ 203

  Fly   310 LLTIINDEDFPRMP--------NLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGL 366
                 ||.....:|        |::.|...|||:..........||:||.|.|.||.:..:...:
Mosquito   204 -----NDNRLRALPKCLEQAFLNVVRLAFDRNQLQPDVMFQFGRLTSLKFLTLTDNKLPYVTLNM 263

  Fly   367 SKL-SQLQELSITSNRLRWINDTELP----------------------RSMQMLDMRANPLS--- 405
            |.: .||:.|:::.|:|:.::....|                      .::..|.|..|||.   
Mosquito   264 STIPKQLRHLNLSHNKLKHLDVPYAPSKDFHIDVSSNCISSVDWDRVSANLTKLGMGENPLDCSF 328

  Fly   406 -TISPGA---------FR--GMSKLRKLILSDVR---------TLRSFPELEA-------CHALE 442
             :||..|         ||  .::||...:|..|:         |::..|..:|       ..:|.
Mosquito   329 HSISTRADIRSKLHIHFRYLNVTKLHSDLLDRVKLSNDETLQATIQHSPIQQAYLSSRTNITSLL 393

  Fly   443 ILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLR-LLDLSSNQIEKIQGKPFN 506
            :|..:.:.|:..|.|     |:|:.|.:..:.|:.:|:  |.:.|. :|:|..|:|..:.....:
Mosquito   394 LLDTNLSDIEIEPHN-----PKLEILTIMKSRLRCVPD--SIKQLAVVLNLMQNKISFLNYSCSS 451

  Fly   507 GLK--QLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLGNNIF 569
            |::  .|..:.|::|.:..:..:.|.|:..|.:|||..|.:..:  |.....::|.||.|.:|.|
Mosquito   452 GVEFPSLRVIYLAHNLLTTIGMNDFNGMKLLNILDLSNNSLHSL--EGQLRLSSLTDLKLSHNHF 514

  Fly   570 PELPESG--LRALLHLKTFNNPKLREFPP--PDTFPRIQTL-----ILSY------AYHCCAFLP 619
            .||...|  |.:|.:| ..||..|:..|.  .|..|.:..|     :||.      .....:.|.
Mosquito   515 TELSCCGWNLSSLTNL-DINNNTLQRLPTCMEDALPIVSYLNLVSNVLSNDDNIWDRLASLSQLT 578

  Fly   620 LVAMSSQKKTSQVQEAVLFPSDAEFDMTLWNNSM--MNIWPQMHNLSKQLGASMHDPWE-TAINF 681
            |:.:|..:.||.|.:.|...:..   :.|.||.|  :||...:...:..:|.:..|..| ::.:|
Mosquito   579 LLDLSYNRLTSMVWDNVTLSTRY---INLRNNPMKYLNIPMAIDGFNVDMGCTTFDQLEISSRSF 640

  Fly   682 N 682
            |
Mosquito   641 N 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064 49/211 (23%)
leucine-rich repeat 183..204 CDD:275380 7/23 (30%)
LRR_8 203..263 CDD:290566 14/59 (24%)
leucine-rich repeat 205..228 CDD:275380 5/22 (23%)
leucine-rich repeat 229..252 CDD:275380 3/22 (14%)
LRR_8 252..311 CDD:290566 11/58 (19%)
leucine-rich repeat 253..276 CDD:275380 8/22 (36%)
leucine-rich repeat 277..300 CDD:275380 2/22 (9%)
LRR_8 299..359 CDD:290566 17/67 (25%)
leucine-rich repeat 301..324 CDD:275380 4/30 (13%)
leucine-rich repeat 325..348 CDD:275380 5/22 (23%)
LRR_RI 327..567 CDD:238064 68/296 (23%)
leucine-rich repeat 349..371 CDD:275380 7/22 (32%)
LRR_8 370..425 CDD:290566 19/91 (21%)
leucine-rich repeat 372..393 CDD:275380 5/42 (12%)
leucine-rich repeat 394..415 CDD:275380 10/35 (29%)
leucine-rich repeat 418..486 CDD:275380 17/83 (20%)
leucine-rich repeat 441..464 CDD:275378 5/22 (23%)
LRR_8 487..545 CDD:290566 16/60 (27%)
leucine-rich repeat 487..510 CDD:275380 6/25 (24%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
LRR_8 533..589 CDD:290566 19/57 (33%)
leucine-rich repeat 535..558 CDD:275380 6/22 (27%)
leucine-rich repeat 559..580 CDD:275380 10/22 (45%)
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP008171XP_001689016.1 leucine-rich repeat 103..128 CDD:275380 7/23 (30%)
LRR_8 127..185 CDD:290566 14/59 (24%)
leucine-rich repeat 129..152 CDD:275380 5/22 (23%)
leucine-rich repeat 153..174 CDD:275380 3/22 (14%)
leucine-rich repeat 175..197 CDD:275380 8/38 (21%)
leucine-rich repeat 198..224 CDD:275380 6/36 (17%)
leucine-rich repeat 225..245 CDD:275380 5/19 (26%)
leucine-rich repeat 246..269 CDD:275380 7/22 (32%)
leucine-rich repeat 270..294 CDD:275380 5/23 (22%)
leucine-rich repeat 411..430 CDD:275380 5/20 (25%)
leucine-rich repeat 434..457 CDD:275378 5/22 (23%)
LRR_RI <456..588 CDD:238064 35/134 (26%)
LRR_8 456..514 CDD:290566 16/59 (27%)
leucine-rich repeat 458..481 CDD:275380 5/22 (23%)
LRR <482..>614 CDD:227223 38/137 (28%)
leucine-rich repeat 482..503 CDD:275380 6/22 (27%)
leucine-rich repeat 504..526 CDD:275380 10/21 (48%)
leucine-rich repeat 527..550 CDD:275380 7/23 (30%)
leucine-rich repeat 551..576 CDD:275380 3/24 (13%)
leucine-rich repeat 577..599 CDD:275380 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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