| Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005174327.1 | Gene: | lingo1a / 564943 | ZFINID: | ZDB-GENE-080327-16 | Length: | 615 | Species: | Danio rerio |
| Alignment Length: | 591 | Identity: | 146/591 - (24%) |
|---|---|---|---|
| Similarity: | 234/591 - (39%) | Gaps: | 122/591 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 152 CHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSII 216
Fly 217 NMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLR 281
Fly 282 LEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNL 346
Fly 347 TALKVLELD-----DNLISSLPEGLSKLSQLQELSITSNRLRWINDTELPR-------SMQMLDM 399
Fly 400 RANP------------------------LSTISPGAFRGMSKLRKLILSD--VRTL-----RSFP 433
Fly 434 ELEA-----------CHALEILKLDRAGIQEVPANLCRQTPRLKSLE-LKTNSLKRI-----PNL 481
Fly 482 SSCRDLRLLDLSSNQ-----------IEKIQGKPFNGLKQLND-----LLLSYNRIKALPQDAFQ 530
Fly 531 GIPKLQLLDLEGN-EISYIHKEAFSGFTALEDLNLGNNIFPELPESGLRALLHLKTF-NNPKLRE 593
Fly 594 FPPPDTFP-RIQTLILSYAYHCCAFLPLVAMSSQKKTSQVQEAVLFPSDAEFDMTLWNNSMMNIW 657
Fly 658 PQMHNL 663 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 3/20 (15%) |
| LRR_RI | 180..>383 | CDD:238064 | 68/207 (33%) | ||
| leucine-rich repeat | 183..204 | CDD:275380 | 5/20 (25%) | ||
| LRR_8 | 203..263 | CDD:290566 | 24/59 (41%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 252..311 | CDD:290566 | 19/58 (33%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 299..359 | CDD:290566 | 21/64 (33%) | ||
| leucine-rich repeat | 301..324 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 325..348 | CDD:275380 | 7/22 (32%) | ||
| LRR_RI | 327..567 | CDD:238064 | 69/316 (22%) | ||
| leucine-rich repeat | 349..371 | CDD:275380 | 8/26 (31%) | ||
| LRR_8 | 370..425 | CDD:290566 | 20/85 (24%) | ||
| leucine-rich repeat | 372..393 | CDD:275380 | 7/27 (26%) | ||
| leucine-rich repeat | 394..415 | CDD:275380 | 10/44 (23%) | ||
| leucine-rich repeat | 418..486 | CDD:275380 | 20/91 (22%) | ||
| leucine-rich repeat | 441..464 | CDD:275378 | 4/22 (18%) | ||
| LRR_8 | 487..545 | CDD:290566 | 10/74 (14%) | ||
| leucine-rich repeat | 487..510 | CDD:275380 | 5/33 (15%) | ||
| leucine-rich repeat | 511..534 | CDD:275380 | 4/27 (15%) | ||
| LRR_8 | 533..589 | CDD:290566 | 11/57 (19%) | ||
| leucine-rich repeat | 535..558 | CDD:275380 | 3/23 (13%) | ||
| leucine-rich repeat | 559..580 | CDD:275380 | 4/20 (20%) | ||
| 7tm_4 | 764..>892 | CDD:304433 | |||
| 7tm_1 | 770..1017 | CDD:278431 | |||
| lingo1a | XP_005174327.1 | LRRNT | 34..68 | CDD:214470 | 7/30 (23%) |
| LRR_RI | <55..231 | CDD:238064 | 58/175 (33%) | ||
| leucine-rich repeat | 66..89 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 88..148 | CDD:290566 | 24/59 (41%) | ||
| leucine-rich repeat | 90..113 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 114..137 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 136..196 | CDD:290566 | 19/59 (32%) | ||
| leucine-rich repeat | 138..185 | CDD:275380 | 15/46 (33%) | ||
| LRR_8 | 184..241 | CDD:290566 | 20/56 (36%) | ||
| leucine-rich repeat | 186..209 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 210..257 | CDD:275380 | 14/46 (30%) | ||
| leucine-rich repeat | 234..256 | CDD:275380 | 6/21 (29%) | ||
| LRR_8 | 257..316 | CDD:290566 | 11/67 (16%) | ||
| leucine-rich repeat | 258..281 | CDD:275380 | 7/27 (26%) | ||
| leucine-rich repeat | 282..305 | CDD:275380 | 4/22 (18%) | ||
| LRR_8 | 305..364 | CDD:290566 | 15/58 (26%) | ||
| leucine-rich repeat | 306..329 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 330..350 | CDD:275380 | 5/19 (26%) | ||
| TPKR_C2 | 362..>398 | CDD:301599 | 8/41 (20%) | ||
| I-set | 421..507 | CDD:254352 | 15/89 (17%) | ||
| Ig | 432..507 | CDD:299845 | 13/78 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||