Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001340791.1 | Gene: | lgr4 / 558825 | ZFINID: | ZDB-GENE-111013-1 | Length: | 971 | Species: | Danio rerio |
Alignment Length: | 963 | Identity: | 278/963 - (28%) |
---|---|---|---|
Similarity: | 432/963 - (44%) | Gaps: | 176/963 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 121 GSQLSTASTATDVIAGKRTLHSICERWLQKHCHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLD 185
Fly 186 LGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGL 250
Fly 251 AQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIIN 315
Fly 316 DEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGLSKLSQLQELSITSN 380
Fly 381 RLRWIND-----TELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPELEACHA 440
Fly 441 LEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLRLLDLSSNQIEKIQGKPF 505
Fly 506 NGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLGNNIFP 570
Fly 571 ELPESGLRALLHLKTFNNPKLREFPPPDTFPRIQTLILSYAYHCCAFLPLVAMSSQKKTSQVQEA 635
Fly 636 VLFPSDAEFDMTLWNNSMMNIWPQMHNLSKQLGASMHDPWETAIN-FNEEQLQTQTGGQIATSYM 699
Fly 700 EEYFEEHDVSGPATGYGFGTGLFSGMSTEDFQ--PGSVQCLPMPGPFLPCADLFDWWTLRCGVWV 762
Fly 763 VFLLSLLGNGTVVFVLLCSR-SKMDVPRFLVCNLAAADFFMGIYLGILAIVDAATLGEFRMFAIP 826
Fly 827 WQMSVLCQLSGFLAVLSSELSVYTLAVITLERNYAITHAIHLNKRLSLKQAGYIMSVG------W 885
Fly 886 VFALIMALMPLVGV-----SDYRKFA----VCLPFETTTGPASLTYVISLMFINGCAFLTLMGCY 941
Fly 942 LKMYWAIRGSQAWNTNDSRIAKRMALLVFTDFLCWSPIAFFSITAIFGLQLISL---EQAKIFTV 1003
Fly 1004 FVLPLNSCCNPFLYAIMTKQFKKDCVTLCKHFEESRVVGGGGPGGRG-AVART 1055 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 6/20 (30%) |
LRR_RI | 180..>383 | CDD:238064 | 75/202 (37%) | ||
leucine-rich repeat | 183..204 | CDD:275380 | 9/20 (45%) | ||
LRR_8 | 203..263 | CDD:290566 | 26/59 (44%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 252..311 | CDD:290566 | 21/58 (36%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 299..359 | CDD:290566 | 21/59 (36%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | 327..567 | CDD:238064 | 74/244 (30%) | ||
leucine-rich repeat | 349..371 | CDD:275380 | 7/21 (33%) | ||
LRR_8 | 370..425 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 372..393 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 394..415 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 418..486 | CDD:275380 | 19/67 (28%) | ||
leucine-rich repeat | 441..464 | CDD:275378 | 9/22 (41%) | ||
LRR_8 | 487..545 | CDD:290566 | 16/57 (28%) | ||
leucine-rich repeat | 487..510 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 533..589 | CDD:290566 | 22/55 (40%) | ||
leucine-rich repeat | 535..558 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 559..580 | CDD:275380 | 7/20 (35%) | ||
7tm_4 | 764..>892 | CDD:304433 | 45/134 (34%) | ||
7tm_1 | 770..1017 | CDD:278431 | 79/265 (30%) | ||
lgr4 | NP_001340791.1 | LRR 1 | 58..82 | 10/23 (43%) | |
leucine-rich repeat | 64..85 | CDD:275380 | 9/20 (45%) | ||
LRR_8 | 84..144 | CDD:316378 | 26/59 (44%) | ||
LRR 2 | 84..106 | 9/21 (43%) | |||
leucine-rich repeat | 86..109 | CDD:275380 | 10/22 (45%) | ||
LRR 3 | 107..130 | 10/22 (45%) | |||
leucine-rich repeat | 110..133 | CDD:275380 | 10/22 (45%) | ||
LRR 4 | 131..154 | 8/22 (36%) | |||
leucine-rich repeat | 134..157 | CDD:275380 | 8/22 (36%) | ||
LRR | 137..>452 | CDD:227223 | 108/341 (32%) | ||
LRR 5 | 156..178 | 8/21 (38%) | |||
leucine-rich repeat | 158..181 | CDD:275380 | 7/22 (32%) | ||
LRR 6 | 179..202 | 9/22 (41%) | |||
leucine-rich repeat | 182..205 | CDD:275380 | 9/22 (41%) | ||
LRR 7 | 204..226 | 7/21 (33%) | |||
leucine-rich repeat | 206..229 | CDD:275380 | 8/22 (36%) | ||
LRR 8 | 227..250 | 7/22 (32%) | |||
leucine-rich repeat | 230..252 | CDD:275380 | 7/21 (33%) | ||
LRR_8 | 251..308 | CDD:316378 | 19/59 (32%) | ||
LRR 9 | 251..273 | 6/21 (29%) | |||
leucine-rich repeat | 253..276 | CDD:275380 | 6/22 (27%) | ||
LRR 10 | 275..297 | 9/24 (38%) | |||
leucine-rich repeat | 277..298 | CDD:275380 | 8/23 (35%) | ||
LRR 11 | 299..321 | 7/21 (33%) | |||
LRR 12 | 322..344 | 9/21 (43%) | |||
LRR 13 | 345..366 | 5/44 (11%) | |||
leucine-rich repeat | 348..369 | CDD:275380 | 6/44 (14%) | ||
LRR 14 | 367..390 | 7/22 (32%) | |||
leucine-rich repeat | 370..393 | CDD:275380 | 9/22 (41%) | ||
LRR 15 | 391..414 | 10/22 (45%) | |||
leucine-rich repeat | 394..415 | CDD:275380 | 10/20 (50%) | ||
LRR 16 | 416..438 | 8/21 (38%) | |||
leucine-rich repeat | 418..438 | CDD:275380 | 7/19 (37%) | ||
7tmA_LGR4 | 527..811 | CDD:320483 | 89/292 (30%) | ||
TM helix 1 | 528..554 | CDD:320483 | 8/25 (32%) | ||
TM helix 2 | 562..587 | CDD:320483 | 10/24 (42%) | ||
TM helix 3 | 607..637 | CDD:320483 | 16/37 (43%) | ||
TM helix 4 | 649..679 | CDD:320483 | 8/29 (28%) | ||
TM helix 5 | 698..727 | CDD:320483 | 8/29 (28%) | ||
TM helix 6 | 736..766 | CDD:320483 | 8/29 (28%) | ||
TM helix 7 | 779..804 | CDD:320483 | 11/24 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I8243 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 384 | 1.000 | Inparanoid score | I1997 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D171884at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm26229 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106088 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2481 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.870 |