DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and TLR9

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_059138.1 Gene:TLR9 / 54106 HGNCID:15633 Length:1032 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
TLR9NP_059138.1 leucine-rich repeat 43..64 CDD:275380
Interaction with CpG-DNA. /evidence=ECO:0000250|UniProtKB:Q2EEY0 47..51
LRR 1 62..85
LRR_8 64..135 CDD:290566
leucine-rich repeat 65..88 CDD:275380
Interaction with CpG-DNA. /evidence=ECO:0000250|UniProtKB:Q2EEY0 72..77
LRR 2 87..110
leucine-rich repeat 89..124 CDD:275380
Interaction with CpG-DNA. /evidence=ECO:0000250|UniProtKB:Q2EEY0 95..109
LRR 3 122..147
LRR_8 123..177 CDD:290566
leucine-rich repeat 125..144 CDD:275380
leucine-rich repeat 145..168 CDD:275380
LRR 4 150..166
LRR 5 167..190
leucine-rich repeat 169..200 CDD:275380
Interaction with CpG-DNA. /evidence=ECO:0000250|UniProtKB:Q2EEY0 179..181
LRR 6 198..221
LRR_8 200..254 CDD:290566
leucine-rich repeat 201..221 CDD:275380
leucine-rich repeat 222..245 CDD:275380
LRR 7 223..242
LRR 8 243..268
leucine-rich repeat 246..285 CDD:275380
LRR 9 283..306
LRR_8 284..344 CDD:290566
leucine-rich repeat 286..307 CDD:275380
LRR 10 308..332
leucine-rich repeat 310..335 CDD:275380
LRR 11 333..356
leucine-rich repeat 336..365 CDD:275380
LRR 12 363..386
leucine-rich repeat 366..392 CDD:275380
LRR 13 390..413
leucine-rich repeat 393..416 CDD:275380
LRR 14 415..440
leucine-rich repeat 417..472 CDD:275380
LRR 15 470..494
LRR_RI 476..739 CDD:238064
leucine-rich repeat 476..497 CDD:275380
LRR_8 496..555 CDD:290566
LRR 16 496..519
leucine-rich repeat 498..522 CDD:275380
LRR 17 520..543
leucine-rich repeat 523..546 CDD:275380
LRR 18 545..572
leucine-rich repeat 547..599 CDD:275380
LRR 19 574..598
LRR_8 598..665 CDD:290566
leucine-rich repeat 600..629 CDD:275380
LRR 20 600..622
LRR 21 627..650
leucine-rich repeat 630..654 CDD:275380
LRR 22 652..675
leucine-rich repeat 655..678 CDD:275380
LRR 23 676..699
leucine-rich repeat 679..702 CDD:275380
LRR_8 701..762 CDD:290566
LRR 24 701..723
leucine-rich repeat 703..726 CDD:275380
LRR 25 724..747
leucine-rich repeat 727..748 CDD:275380
LRR 26 749..772
leucine-rich repeat 752..770 CDD:275380
TIR_2 870..1009 CDD:304906
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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