Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102630.1 | Gene: | Flrt1 / 499308 | RGDID: | 1565152 | Length: | 674 | Species: | Rattus norvegicus |
Alignment Length: | 491 | Identity: | 120/491 - (24%) |
---|---|---|---|
Similarity: | 198/491 - (40%) | Gaps: | 132/491 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 152 CHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNL----------TKLEANSFFMAPN-- 204
Fly 205 ----------LEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLK--SLPPQSFQGLAQLTSLQ 257
Fly 258 LNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLT--IINDEDFP 320
Fly 321 RMPNLIVLLLKRNQIMKISAGALKNLTA--LKVLELDDNLISSLP-EGLSKLSQLQELSITSNRL 382
Fly 383 RWINDTELPRSM--------QMLDMRANP-------------------LSTISPGAFRGMSKLRK 420
Fly 421 LILSDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQ----------TPR--LKSLELKTN 473
Fly 474 SLKRIPNLSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLL 538
Fly 539 DL--------------EGNEISYIHKEAFSGFTALE 560 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 3/20 (15%) |
LRR_RI | 180..>383 | CDD:238064 | 68/231 (29%) | ||
leucine-rich repeat | 183..204 | CDD:275380 | 6/30 (20%) | ||
LRR_8 | 203..263 | CDD:290566 | 17/73 (23%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 5/24 (21%) | ||
LRR_8 | 252..311 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 299..359 | CDD:290566 | 24/63 (38%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 10/24 (42%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | 327..567 | CDD:238064 | 66/290 (23%) | ||
leucine-rich repeat | 349..371 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 370..425 | CDD:290566 | 16/81 (20%) | ||
leucine-rich repeat | 372..393 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 394..415 | CDD:275380 | 5/47 (11%) | ||
leucine-rich repeat | 418..486 | CDD:275380 | 17/79 (22%) | ||
leucine-rich repeat | 441..464 | CDD:275378 | 6/32 (19%) | ||
LRR_8 | 487..545 | CDD:290566 | 12/71 (17%) | ||
leucine-rich repeat | 487..510 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 533..589 | CDD:290566 | 9/42 (21%) | ||
leucine-rich repeat | 535..558 | CDD:275380 | 5/36 (14%) | ||
leucine-rich repeat | 559..580 | CDD:275380 | 2/2 (100%) | ||
7tm_4 | 764..>892 | CDD:304433 | |||
7tm_1 | 770..1017 | CDD:278431 | |||
Flrt1 | NP_001102630.1 | PRK15370 | <58..>329 | CDD:185268 | 82/287 (29%) |
leucine-rich repeat | 108..128 | CDD:275380 | 1/19 (5%) | ||
leucine-rich repeat | 129..152 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 153..178 | CDD:275380 | 5/24 (21%) | ||
leucine-rich repeat | 179..199 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 224..249 | CDD:275380 | 10/24 (42%) | ||
leucine-rich repeat | 250..271 | CDD:275380 | 8/24 (33%) | ||
leucine-rich repeat | 272..295 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 296..319 | CDD:275380 | 8/27 (30%) | ||
PCC | 300..>386 | CDD:188093 | 20/104 (19%) | ||
FN3 | 441..505 | CDD:214495 | 16/75 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |