DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and AgaP_AGAP008170

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_001237909.2 Gene:AgaP_AGAP008170 / 4577934 VectorBaseID:AGAP008170 Length:387 Species:Anopheles gambiae


Alignment Length:339 Identity:84/339 - (24%)
Similarity:139/339 - (41%) Gaps:94/339 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 NLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMD-----------PNAFY----- 224
            ::||..|:|.|.|     |:.|:|    ||:.:.....|.|.::           |.|.:     
Mosquito    20 HIPNNTVLLKLVN-----LKTNTF----NLDTIDFVKTSGIGVEIERSSVKKVVMPAAGHIIRLV 75

  Fly   225 -------------GLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQK 276
                         |..:|..|.:.:..|||: |.:...||.|.:::::.:::.:::.:..|.|..
Mosquito    76 LVRTYLSDIVFDEGNERLSSLIISDSRLKSI-PSTITHLAALGTVEISKSSIETVNMNLFGKLTH 139

  Fly   277 LRTLRLEGNLFYRIPTNALAG--LRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKI- 338
            ||.|.|..|....:..:..||  ...|..|.|..|.||.||...|..||:|..|.|:.|:|.:: 
Mosquito   140 LRYLNLCDNKILSLHLSGAAGADFAQLSDLFLSGNQLTAINLSGFNGMPSLETLDLQNNRIRRVQ 204

  Fly   339 ---SAGALK-----------------NLTALKVLELDDNLISSLPEGLS---------------- 367
               .:..||                 ||.:|..|.|..|.:|.||..||                
Mosquito   205 GTLESNTLKTLDLSWNRIDVLYCCEWNLPSLVRLTLSRNELSRLPTCLSLVMPNVTYLLLDSNAL 269

  Fly   368 ----------KLSQLQELSITSNRL-RWINDTELPRSMQMLDMRANPLSTIS-PGAFRGM---SK 417
                      .|..||:|.|:.||| |.:.|| |.:|:.:|:::.|.:..:| |.|.:.:   :.
Mosquito   270 TDGDSWYSILTLEGLQQLDISHNRLTRAVFDT-LSQSLHILNLQNNNIKVLSVPVAGKRLKINAS 333

  Fly   418 LRKLILSDVRTLRS 431
            ...:...|:::|.|
Mosquito   334 FNSIDTFDIKSLSS 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380 0/2 (0%)
LRR_RI 180..>383 CDD:238064 69/281 (25%)
leucine-rich repeat 183..204 CDD:275380 6/20 (30%)
LRR_8 203..263 CDD:290566 16/88 (18%)
leucine-rich repeat 205..228 CDD:275380 6/51 (12%)
leucine-rich repeat 229..252 CDD:275380 7/22 (32%)
LRR_8 252..311 CDD:290566 14/60 (23%)
leucine-rich repeat 253..276 CDD:275380 3/22 (14%)
leucine-rich repeat 277..300 CDD:275380 7/24 (29%)
LRR_8 299..359 CDD:290566 24/80 (30%)
leucine-rich repeat 301..324 CDD:275380 10/22 (45%)
leucine-rich repeat 325..348 CDD:275380 9/43 (21%)
LRR_RI 327..567 CDD:238064 38/157 (24%)
leucine-rich repeat 349..371 CDD:275380 10/47 (21%)
LRR_8 370..425 CDD:290566 17/59 (29%)
leucine-rich repeat 372..393 CDD:275380 11/21 (52%)
leucine-rich repeat 394..415 CDD:275380 5/21 (24%)
leucine-rich repeat 418..486 CDD:275380 3/14 (21%)
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP008170XP_001237909.2 LRR_8 92..150 CDD:290566 16/58 (28%)
leucine-rich repeat 93..115 CDD:275380 7/22 (32%)
leucine-rich repeat 116..139 CDD:275380 3/22 (14%)
LRR_8 138..200 CDD:290566 22/61 (36%)
LRR_RI 140..321 CDD:238064 51/181 (28%)
leucine-rich repeat 140..165 CDD:275380 7/24 (29%)
leucine-rich repeat 166..189 CDD:275380 10/22 (45%)
LRR_8 188..245 CDD:290566 14/56 (25%)
leucine-rich repeat 190..234 CDD:275380 9/43 (21%)
LRR_8 233..294 CDD:290566 15/60 (25%)
leucine-rich repeat 235..258 CDD:275380 9/22 (41%)
leucine-rich repeat 259..283 CDD:275380 1/23 (4%)
leucine-rich repeat 284..305 CDD:275380 11/21 (52%)
leucine-rich repeat 328..348 CDD:275378 3/20 (15%)
leucine-rich repeat 349..361 CDD:275378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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