DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rk and Tollo

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster


Alignment Length:1284 Identity:282/1284 - (21%)
Similarity:451/1284 - (35%) Gaps:354/1284 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PYVHLQHLQQQQQQNPQTVQQLSQ--ITVNRTSKSASVTPTGIR-------ENVMLPSADPEKEA 108
            |...||||.....:    :|.:|.  .:.:.:|:.|.|..:.::       :.|.||:|      
  Fly   174 PLKSLQHLNASYNK----IQDISNFYFSASLSSRKARVCGSTLQSLDLSANKMVSLPTA------ 228

  Fly   109 QILYEKSLQEYHGSQLSTASTATDVIAGKRTLHSICERWLQKHCHCTGSLEVLRLSCRGIGILAV 173
                          .||.....|.:...|.::..:.:|..:                   |:|::
  Fly   229 --------------MLSALGRLTHLNMAKNSMSFLADRAFE-------------------GLLSL 260

  Fly   174 PVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCG 238
            .        |:||..|.||.|....|.....|:|:.|.:|||..:.|..|..||:|..|.|.:..
  Fly   261 R--------VVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNE 317

  Fly   239 LKS--LPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTL 301
            |.|  :...:|.||.:|..|.|:.|.:..|:......|..|:.|:||.|...::|....|.|..|
  Fly   318 LNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNL 382

  Fly   302 EALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGL 366
            ..|.|..|.:::|.......:.||:||.|..|:|.::...:|.|.:.|:.|.|:||.:.::||.|
  Fly   383 HTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEAL 447

  Fly   367 SKLSQLQELSITSNRLRWINDTELPR--SMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTL 429
            :.:..|:.|.:..|.:..|.:|.:.:  |:..|.|..|.|:.|..|.|..||.|:.|.||. ..|
  Fly   448 AHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQ-NKL 511

  Fly   430 RSFP--ELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLRLLDL 492
            :|..  .|:....|:.::||...::.: |.|..:.|.|..|.:..|.|::.........|:.||:
  Fly   512 KSIEAGSLQRNSQLQAIRLDGNQLKSI-AGLFTELPNLVWLNISGNRLEKFDYSHIPIGLQWLDV 575

  Fly   493 SSNQIEKIQGKPF--NGLKQLNDLLLSYNRIKALPQDAFQGIP-KLQLLDLEGNEISYIHKEAFS 554
            .:|:|.:: |..|  .....|:....|||   .|.:.....|| .:::|.|..|:||.|....|.
  Fly   576 RANRITQL-GNYFEIESELSLSTFDASYN---LLTEITASSIPNSVEVLYLNDNQISKIQPYTFF 636

  Fly   555 GFTALEDLNLGNNIFPELPESGLRALLHLKTFNNP--KLREFP---------------------- 595
            ....|..::|..|....|..:.||.        :|  :.||.|                      
  Fly   637 KKPNLTRVDLVRNRLTTLEPNALRL--------SPIAEDREIPEFYIGHNAYECDCNLDWLQKVN 693

  Fly   596 -PPDTFPRIQTL-----ILSYA---------------------------YHCCAFLP-------- 619
             ...|.|::..|     .|:||                           .|||.|..        
  Fly   694 RESRTQPQLMDLDQIHCRLAYARGSSHVSLIEAKSDDFLCKYASHCFALCHCCDFQACDCKMECP 758

  Fly   620 --LVAMSSQKKTSQVQEAVLFPSDAEFDMTLWNNSMMNIWPQMHNLSKQLGASMHDPWETAINFN 682
              ......|..||.|.:.    |.|.::.||.::..|:        |.||       :....||.
  Fly   759 DRCSCYHDQSWTSNVVDC----SRASYEQTLPSHIPMD--------STQL-------YLDGNNFR 804

  Fly   683 EEQLQTQTGGQIATSYMEEYFEEH---DVSGPATGYGFGTGLFSGMSTEDFQPGSVQCLPMPG-P 743
            |    .|:...|....::.....|   :|....|.||.       :..|..|..|.|...:.| .
  Fly   805 E----LQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGL-------LELEVLQLQSNQLKALNGNE 858

  Fly   744 FLPCADLFDWWTLRCGVWVVFLLSLLGNGTVVFVLLCSRSKMD---VPRFLVCNLAAADFFMGIY 805
            |....:|.:.:.....:..:..|:.    |.::.|...|  :|   :..|.|.|      |:..|
  Fly   859 FQGLDNLQELYLQHNAIATIDTLTF----THLYHLKILR--LDHNAITSFAVWN------FLPSY 911

  Fly   806 LGILAIVDAATLGEFRMFAIPWQMSVLCQLSGFLAVLSSELSVYTLAVITLERNYAITHAIHLNK 870
                       |.|.|:.:.||..|  |:   |:..|               |:|...|...::|
  Fly   912 -----------LNELRLASNPWTCS--CE---FIDKL---------------RDYINRHEYVVDK 945

  Fly   871 RLSLKQAGYIMSVGWVFALIM-------ALMPLV--------GVSDYRKFAVCLPFETTTG---- 916
               ||....::|......:::       |.:|:|        |:.:...:|.....|..:.    
  Fly   946 ---LKMKCDVISGNSTQQMVIYPGSGEPASLPVVQCSQTLPLGLDNNFNYAEQAGGENASNATST 1007

  Fly   917 ------PASLTYVISLMFINGCAFLTLMGCYLKMYWAIRGSQAWNTNDSRIAKRMALLVFTDFLC 975
                  |..|.|:..|:.|. .||:.:|.|...::...:..:.|                    |
  Fly  1008 KMILNQPPKLDYIPILVAIL-TAFIFVMICISLVFIFRQEMRVW--------------------C 1051

  Fly   976 WSPIAFFSITAIFGLQ--LISLEQAKIFTVFV-------LPLNSCCNPFLYAIMTKQFKKDCVTL 1031
            .|.   |.:...:..|  :...|:.|:|..||       |.:|....|.|      :..:....|
  Fly  1052 HSR---FGVRLFYNAQKDVDKNEREKLFDAFVSYSSKDELFVNEELAPML------EMGEHRYKL 1107

  Fly  1032 CKHFEESRVVGGGGPGGRGAVARTKRGDLPPPLLPAAAVAHPPGCRCLRMLPSEMPNWHKMEQTP 1096
            |.| :....|||                    .||...|......|...|:.||  |:.|.|   
  Fly  1108 CLH-QRDFPVGG--------------------YLPETIVQAIDSSRRTIMVVSE--NFIKSE--- 1146

  Fly  1097 SMWQRLRTFCCGENRRRRKQRR--------QPQQRRQ---RAYTAAAANPYQYQFAELRQQRQNR 1150
              |.|.......::..|.::||        .||:...   |.|  ...|.|.....:|..|:...
  Fly  1147 --WCRFEFKSAHQSVLRDRRRRLIVIVLGEVPQKELDPDLRLY--LKTNTYLQWGDKLFWQKLRF 1207

  Fly  1151 A-SSISSENFCSSRSSSWRHGPPSSAPVPPGNCSMPLKMLEPHAHPHGH 1198
            | ..:||    |.||:           |...:|.:|:.....|.|.|.|
  Fly  1208 ALPDVSS----SQRSN-----------VAGQSCHVPINHASYHHHHHVH 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380 2/20 (10%)
LRR_RI 180..>383 CDD:238064 65/204 (32%)
leucine-rich repeat 183..204 CDD:275380 8/20 (40%)
LRR_8 203..263 CDD:290566 22/61 (36%)
leucine-rich repeat 205..228 CDD:275380 9/22 (41%)
leucine-rich repeat 229..252 CDD:275380 8/24 (33%)
LRR_8 252..311 CDD:290566 18/58 (31%)
leucine-rich repeat 253..276 CDD:275380 6/22 (27%)
leucine-rich repeat 277..300 CDD:275380 8/22 (36%)
LRR_8 299..359 CDD:290566 19/59 (32%)
leucine-rich repeat 301..324 CDD:275380 5/22 (23%)
leucine-rich repeat 325..348 CDD:275380 8/22 (36%)
LRR_RI 327..567 CDD:238064 70/246 (28%)
leucine-rich repeat 349..371 CDD:275380 8/21 (38%)
LRR_8 370..425 CDD:290566 18/56 (32%)
leucine-rich repeat 372..393 CDD:275380 5/22 (23%)
leucine-rich repeat 394..415 CDD:275380 7/20 (35%)
leucine-rich repeat 418..486 CDD:275380 17/69 (25%)
leucine-rich repeat 441..464 CDD:275378 5/22 (23%)
LRR_8 487..545 CDD:290566 17/60 (28%)
leucine-rich repeat 487..510 CDD:275380 7/24 (29%)
leucine-rich repeat 511..534 CDD:275380 7/23 (30%)
LRR_8 533..589 CDD:290566 14/56 (25%)
leucine-rich repeat 535..558 CDD:275380 7/22 (32%)
leucine-rich repeat 559..580 CDD:275380 6/20 (30%)
7tm_4 764..>892 CDD:304433 26/137 (19%)
7tm_1 770..1017 CDD:278431 53/283 (19%)
TolloNP_524757.1 LRR_RI <85..281 CDD:238064 29/157 (18%)
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..144 CDD:275380
LRR_8 152..222 CDD:290566 10/51 (20%)
leucine-rich repeat 154..177 CDD:275380 1/2 (50%)
leucine-rich repeat 178..201 CDD:275380 6/26 (23%)
LRR 210..656 CDD:227223 130/498 (26%)
leucine-rich repeat 212..235 CDD:275380 6/42 (14%)
leucine-rich repeat 236..259 CDD:275380 4/41 (10%)
leucine-rich repeat 260..283 CDD:275380 8/30 (27%)
LRR_RI 276..558 CDD:238064 86/283 (30%)
leucine-rich repeat 284..307 CDD:275380 9/22 (41%)
leucine-rich repeat 308..333 CDD:275380 8/24 (33%)
leucine-rich repeat 334..357 CDD:275380 6/22 (27%)
leucine-rich repeat 358..381 CDD:275380 8/22 (36%)
leucine-rich repeat 382..405 CDD:275380 5/22 (23%)
leucine-rich repeat 406..429 CDD:275380 8/22 (36%)
leucine-rich repeat 430..452 CDD:275380 8/21 (38%)
leucine-rich repeat 453..500 CDD:275380 14/46 (30%)
leucine-rich repeat 501..521 CDD:275380 7/20 (35%)
leucine-rich repeat 525..547 CDD:275380 5/22 (23%)
leucine-rich repeat 548..573 CDD:275380 5/24 (21%)
leucine-rich repeat 604..640 CDD:275380 10/35 (29%)
leucine-rich repeat 641..688 CDD:275380 10/54 (19%)
leucine-rich repeat 689..816 CDD:275380 27/149 (18%)
LRR_8 815..875 CDD:290566 12/66 (18%)
leucine-rich repeat 817..864 CDD:275380 11/53 (21%)
LRR_8 864..921 CDD:290566 14/79 (18%)
leucine-rich repeat 865..888 CDD:275380 3/26 (12%)
leucine-rich repeat 889..910 CDD:275380 7/28 (25%)
TIR 1076..1211 CDD:214587 37/170 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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