DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and Flrt2

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_958926.1 Gene:Flrt2 / 399558 MGIID:3603594 Length:660 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
Flrt2NP_958926.1 PRK15370 <26..>265 CDD:185268
LRR 1. /evidence=ECO:0000255 62..87
leucine-rich repeat 65..86 CDD:275378
LRR 2. /evidence=ECO:0000255 88..108
leucine-rich repeat 90..110 CDD:275380
LRR 3. /evidence=ECO:0000255 109..131
leucine-rich repeat 111..134 CDD:275380
LRR 4. /evidence=ECO:0000255 132..157
leucine-rich repeat 135..160 CDD:275380
LRR 5. /evidence=ECO:0000255 159..181
leucine-rich repeat 161..181 CDD:275380
leucine-rich repeat 182..205 CDD:275380
LRR 6. /evidence=ECO:0000255 183..202
LRR 7. /evidence=ECO:0000255 203..228
leucine-rich repeat 206..231 CDD:275380
LRR 8. /evidence=ECO:0000255 229..251
leucine-rich repeat 232..253 CDD:275380
LRR_8 252..311 CDD:404697
LRR 9. /evidence=ECO:0000255 252..274
leucine-rich repeat 254..277 CDD:275380
LRR 10. /evidence=ECO:0000255 275..298
leucine-rich repeat 278..301 CDD:275380
PCC 282..>359 CDD:188093
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..413
fn3 426..494 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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