DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and AgaP_AGAP003878

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_559671.4 Gene:AgaP_AGAP003878 / 3290920 VectorBaseID:AGAP003878 Length:569 Species:Anopheles gambiae


Alignment Length:481 Identity:109/481 - (22%)
Similarity:195/481 - (40%) Gaps:95/481 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ILAVPVNLP-NEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLS 233
            ||.|....| ..:..:::...:|:::|..:|...|.|.::.:..|.:..::...|.||..|..|.
Mosquito    71 ILTVDSFAPFTN
LTSIEIFQGSLSRIEPGAFEKTPALFKIIIRSNVLSALEDYTFRGLDALHILY 135

  Fly   234 LQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGL 298
            |.:..|.|:.|.:|.||..||.|.|:||.:..|..........||::.|..|:...:|......:
Mosquito   136 LISNNLTSIAPNAFYGLKNLTQLVLSGNQIAQLPPTLFSSTPMLRSVSLSNNMLTELPAGIFDSI 200

  Fly   299 RTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLP 363
            ..|..|:|..|.|...   |||.: .:.:|.|..|.:..:..|     ..:||::.:.|.|    
Mosquito   201 DYLFKLDLSYNQLKTF---DFPDL-KVTLLFLHNNSLTSLHVG-----DHVKVVQANHNRI---- 252

  Fly   364 EGLSKLS----QLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILS 424
               :|||    .:.:|.::.|.:..:....|.:::..|.:..|||...|  .|..:.:|.:|.||
Mosquito   253 ---AKLSGSGFNITDLLLSDNAITDVTPIMLMKNISKLSLSNNPLQPDS--VFGSLEQLEELFLS 312

  Fly   425 DVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLRL 489
            ....:                     |.|       ||               ..|||.   :.|
Mosquito   313 HTSIM---------------------INE-------QT---------------FANLSW---MSL 331

  Fly   490 LDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALP-QDAFQGIPKLQLLDLEGNEISYIHKEAF 553
            ||||.|.:.::..:.|:.:.:|..|:::||||:.:. .:..:.:|:|::|::.||..:..:.|..
Mosquito   332 LDLSYNNMTELDFRMFSSMNKLKSLIVAYNRIETINFIELREYLPELRVLEICGNGWNATYMERM 396

  Fly   554 ----------SGFTALEDLNLGNNIFPELPESGLRALLHLKTFNNPKLREFPPPDTFPRIQTLIL 608
                      :....|.:..:.:::|.||..:|:...  .|..|:  ..::...|....|:..|.
Mosquito   397 LSKMRKHKLRADMQGLSNSLIFSSVFVELCSAGVETT--TKAAND--YSDYYAEDFGDGIEQEIA 457

  Fly   609 SYAYHCCAFLPLVAMSSQKKTSQVQE 634
            .|           |.||.:..|.|.|
Mosquito   458 EY-----------ASSSPRPWSTVSE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380 4/9 (44%)
LRR_RI 180..>383 CDD:238064 51/206 (25%)
leucine-rich repeat 183..204 CDD:275380 3/20 (15%)
LRR_8 203..263 CDD:290566 21/59 (36%)
leucine-rich repeat 205..228 CDD:275380 5/22 (23%)
leucine-rich repeat 229..252 CDD:275380 9/22 (41%)
LRR_8 252..311 CDD:290566 16/58 (28%)
leucine-rich repeat 253..276 CDD:275380 7/22 (32%)
leucine-rich repeat 277..300 CDD:275380 5/22 (23%)
LRR_8 299..359 CDD:290566 15/59 (25%)
leucine-rich repeat 301..324 CDD:275380 8/22 (36%)
leucine-rich repeat 325..348 CDD:275380 4/22 (18%)
LRR_RI 327..567 CDD:238064 51/254 (20%)
leucine-rich repeat 349..371 CDD:275380 7/25 (28%)
LRR_8 370..425 CDD:290566 13/58 (22%)
leucine-rich repeat 372..393 CDD:275380 3/20 (15%)
leucine-rich repeat 394..415 CDD:275380 6/20 (30%)
leucine-rich repeat 418..486 CDD:275380 11/67 (16%)
leucine-rich repeat 441..464 CDD:275378 4/22 (18%)
LRR_8 487..545 CDD:290566 18/58 (31%)
leucine-rich repeat 487..510 CDD:275380 7/22 (32%)
leucine-rich repeat 511..534 CDD:275380 6/23 (26%)
LRR_8 533..589 CDD:290566 13/65 (20%)
leucine-rich repeat 535..558 CDD:275380 5/32 (16%)
leucine-rich repeat 559..580 CDD:275380 5/20 (25%)
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
AgaP_AGAP003878XP_559671.4 leucine-rich repeat 63..82 CDD:275380 4/10 (40%)
leucine-rich repeat 83..106 CDD:275380 3/22 (14%)
LRR_8 105..165 CDD:290566 21/59 (36%)
LRR_4 131..170 CDD:289563 16/38 (42%)
leucine-rich repeat 131..154 CDD:275380 9/22 (41%)
LRR_RI 153..386 CDD:238064 67/296 (23%)
leucine-rich repeat 155..178 CDD:275380 7/22 (32%)
LRR_8 179..233 CDD:290566 16/57 (28%)
leucine-rich repeat 179..202 CDD:275380 5/22 (23%)
leucine-rich repeat 203..241 CDD:275380 12/46 (26%)
leucine-rich repeat 242..261 CDD:275380 7/25 (28%)
LRR_8 261..316 CDD:290566 13/56 (23%)
leucine-rich repeat 262..283 CDD:275380 3/20 (15%)
leucine-rich repeat 284..305 CDD:275380 6/22 (27%)
LRR_8 305..363 CDD:290566 22/103 (21%)
leucine-rich repeat 306..328 CDD:275380 10/64 (16%)
leucine-rich repeat 329..350 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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