DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and Igsf10

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_038958192.1 Gene:Igsf10 / 310448 RGDID:735030 Length:2647 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
Igsf10XP_038958192.1 LRRNT 78..110 CDD:214470
leucine-rich repeat 89..108 CDD:275380
leucine-rich repeat 109..132 CDD:275380
LRR_8 131..191 CDD:404697
leucine-rich repeat 133..156 CDD:275380
leucine-rich repeat 157..180 CDD:275380
LRR_8 180..245 CDD:404697
leucine-rich repeat 181..204 CDD:275380
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..260 CDD:275380
PCC 242..>323 CDD:188093
LRRCT 269..>293 CDD:214507
Ig 532..605 CDD:416386
Ig strand A' 534..537 CDD:409353
Ig strand B 543..550 CDD:409353
Ig strand C 556..562 CDD:409353
Ig strand C' 564..566 CDD:409353
Ig strand D 577..581 CDD:409353
Ig strand E 584..589 CDD:409353
Ig strand F 597..605 CDD:409353
IG 632..712 CDD:214652
Herpes_BLLF1 <1189..1500 CDD:282904
Ig 1690..1763 CDD:416386
Ig strand B 1690..1694 CDD:409353
Ig strand C 1703..1707 CDD:409353
Ig strand E 1730..1734 CDD:409353
Ig strand F 1744..1749 CDD:409353
Ig strand G 1758..1761 CDD:409353
Ig 1768..1861 CDD:416386
Ig strand A 1768..1771 CDD:409353
Ig strand A' 1776..1780 CDD:409353
Ig strand B 1786..1795 CDD:409353
Ig strand C 1800..1805 CDD:409353
Ig strand C' 1808..1810 CDD:409353
Ig strand D 1819..1822 CDD:409353
Ig strand E 1827..1834 CDD:409353
Ig strand F 1840..1848 CDD:409353
Ig strand G 1851..1861 CDD:409353
Ig_3 1865..1944 CDD:404760
Ig strand A 1866..1869 CDD:409353
Ig strand A' 1875..1878 CDD:409353
Ig strand B 1884..1891 CDD:409353
Ig strand C 1897..1903 CDD:409353
Ig strand C' 1909..1911 CDD:409353
Ig strand D 1917..1922 CDD:409353
Ig strand E 1924..1928 CDD:409353
Ig strand F 1937..1945 CDD:409353
Ig strand G 1948..1958 CDD:409353
Ig_3 1965..2044 CDD:404760
putative Ig strand B 1980..1990 CDD:409353
putative Ig strand C 1996..2002 CDD:409353
putative Ig strand D 2018..2021 CDD:409353
putative Ig strand E 2023..2029 CDD:409353
putative Ig strand F 2036..2044 CDD:409353
IG_like 2077..2160 CDD:214653
Ig strand B 2078..2085 CDD:409353
Ig strand C 2093..2097 CDD:409353
Ig strand D 2122..2125 CDD:409353
Ig strand E 2126..2131 CDD:409353
Ig strand F 2139..2147 CDD:409353
Ig strand G 2153..2160 CDD:409353
IG 2178..2252 CDD:214652
IG_like 2283..2354 CDD:214653
Ig strand C 2294..2298 CDD:409353
Ig strand E 2320..2324 CDD:409353
Ig strand F 2334..2339 CDD:409353
Ig_3 2360..2439 CDD:404760
Ig strand B 2379..2383 CDD:409353
Ig strand C 2392..2396 CDD:409353
Ig strand E 2418..2422 CDD:409353
Ig strand F 2432..2437 CDD:409353
Ig_3 2455..2534 CDD:404760
Ig_3 2551..2633 CDD:404760
Ig strand A 2552..2555 CDD:409353
Ig strand A' 2561..2564 CDD:409353
Ig strand B 2570..2577 CDD:409353
Ig strand C 2583..2591 CDD:409353
Ig strand C' 2596..2598 CDD:409353
Ig strand D 2604..2610 CDD:409353
Ig strand E 2612..2616 CDD:409353
Ig strand F 2625..2633 CDD:409353
Ig strand G 2636..2646 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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