Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100254.1 | Gene: | Lgr5 / 299802 | RGDID: | 1307733 | Length: | 907 | Species: | Rattus norvegicus |
Alignment Length: | 918 | Identity: | 270/918 - (29%) |
---|---|---|---|
Similarity: | 425/918 - (46%) | Gaps: | 117/918 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 133 VIAGKRTLHSICERWLQKHCHC--TGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLE 195
Fly 196 ANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNG 260
Fly 261 NALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNL 325
Fly 326 IVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGLSKLSQLQELSITSNRLRWINDTEL 390
Fly 391 PRSMQMLDMR--ANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPELEACHALEILKLDRAGIQE 453
Fly 454 VPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSY 518
Fly 519 NRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLGNNIFPELPESGLRALLHL 583
Fly 584 KTFNNPKLREFPPPDTFPRIQTLILSYAYHCCAFLPLVAMSSQKKTSQVQEAVLFPSDAEFDMTL 648
Fly 649 WNNSMMNIWPQMHNLSKQLGASMHDPWETAINFNEEQLQTQTGGQIATSYMEEYFEEHDVSGPAT 713
Fly 714 GYGFGTGLFSGMSTEDFQPG---------SVQCLPMPGPFLPCADLFDWWTLRCGVWVVFLLSLL 769
Fly 770 GNGTVVFVLLCSRSKMDVPRFLVCNLAAADFFMGIYLGILAIVDAATLGEFRMFAIPWQMSVLCQ 834
Fly 835 LSGFLAVLSSELSVYTLAVITLERNYAITHAIHLNKRLSLKQAGYIMSVGWVFALIMALMPLVGV 899
Fly 900 SDYRKFAVCLPF----ETTTGPASLTYVISLMFINGCAFLTLMGCYLKMYWAIRGSQAWNTNDSR 960
Fly 961 IAKRMALLVFTDFLCWSPIAFFSITAIFGLQLISLEQAKIFTVFVLPLNSCCNPFLYAIMTKQFK 1025
Fly 1026 KDCVTLCK 1033 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 7/20 (35%) |
LRR_RI | 180..>383 | CDD:238064 | 68/202 (34%) | ||
leucine-rich repeat | 183..204 | CDD:275380 | 7/20 (35%) | ||
LRR_8 | 203..263 | CDD:290566 | 25/59 (42%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 252..311 | CDD:290566 | 19/58 (33%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 299..359 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 327..567 | CDD:238064 | 72/241 (30%) | ||
leucine-rich repeat | 349..371 | CDD:275380 | 6/21 (29%) | ||
LRR_8 | 370..425 | CDD:290566 | 16/56 (29%) | ||
leucine-rich repeat | 372..393 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 394..415 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 418..486 | CDD:275380 | 26/67 (39%) | ||
leucine-rich repeat | 441..464 | CDD:275378 | 9/22 (41%) | ||
LRR_8 | 487..545 | CDD:290566 | 13/57 (23%) | ||
leucine-rich repeat | 487..510 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 533..589 | CDD:290566 | 21/55 (38%) | ||
leucine-rich repeat | 535..558 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 559..580 | CDD:275380 | 7/20 (35%) | ||
7tm_4 | 764..>892 | CDD:304433 | 36/127 (28%) | ||
7tm_1 | 770..1017 | CDD:278431 | 75/250 (30%) | ||
Lgr5 | NP_001100254.1 | LRRNT | 33..70 | CDD:214470 | 11/37 (30%) |
LRR 1 | 44..64 | 6/20 (30%) | |||
LRR 2 | 65..88 | 7/22 (32%) | |||
leucine-rich repeat | 68..91 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 88..372 | CDD:238064 | 91/283 (32%) | ||
LRR 3 | 89..112 | 8/22 (36%) | |||
LRR_8 | 92..150 | CDD:290566 | 25/57 (44%) | ||
leucine-rich repeat | 92..115 | CDD:275380 | 10/22 (45%) | ||
LRR 4 | 114..136 | 8/21 (38%) | |||
leucine-rich repeat | 116..139 | CDD:275380 | 10/22 (45%) | ||
LRR 5 | 137..160 | 7/22 (32%) | |||
LRR_8 | 138..198 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 140..163 | CDD:275380 | 7/22 (32%) | ||
LRR 6 | 162..184 | 7/21 (33%) | |||
leucine-rich repeat | 164..187 | CDD:275380 | 8/22 (36%) | ||
LRR 7 | 186..208 | 7/21 (33%) | |||
LRR_8 | 188..246 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 7/22 (32%) | ||
LRR 8 | 209..232 | 6/22 (27%) | |||
leucine-rich repeat | 212..235 | CDD:275380 | 7/22 (32%) | ||
LRR 9 | 233..256 | 6/22 (27%) | |||
leucine-rich repeat | 236..258 | CDD:275380 | 6/21 (29%) | ||
LRR_8 | 257..314 | CDD:290566 | 16/56 (29%) | ||
LRR 10 | 257..279 | 8/21 (38%) | |||
leucine-rich repeat | 259..282 | CDD:275380 | 7/22 (32%) | ||
LRR 11 | 281..303 | 4/21 (19%) | |||
leucine-rich repeat | 283..304 | CDD:275380 | 4/20 (20%) | ||
LRR 12 | 304..327 | 7/22 (32%) | |||
leucine-rich repeat | 307..353 | CDD:275380 | 16/45 (36%) | ||
LRR 13 | 328..350 | 8/21 (38%) | |||
LRR 14 | 351..375 | 10/23 (43%) | |||
LRR_8 | 352..410 | CDD:290566 | 23/81 (28%) | ||
leucine-rich repeat | 354..375 | CDD:275380 | 9/20 (45%) | ||
leucine-rich repeat | 376..399 | CDD:275380 | 9/46 (20%) | ||
LRR 15 | 377..396 | 7/42 (17%) | |||
LRR 16 | 397..420 | 9/22 (41%) | |||
leucine-rich repeat | 400..423 | CDD:275380 | 10/22 (45%) | ||
LRR 17 | 422..444 | 7/21 (33%) | |||
leucine-rich repeat | 445..467 | CDD:275378 | 8/21 (38%) | ||
LRR 18 | 564..585 | 7/20 (35%) | |||
7tm_1 | 575..820 | CDD:278431 | 75/249 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 93 | 1.000 | Domainoid score | I7387 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H20807 | |
Inparanoid | 1 | 1.050 | 380 | 1.000 | Inparanoid score | I1993 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D171884at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45552 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106088 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2481 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.730 |