Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775450.2 | Gene: | Lgr4 / 286994 | RGDID: | 628615 | Length: | 951 | Species: | Rattus norvegicus |
Alignment Length: | 881 | Identity: | 263/881 - (29%) |
---|---|---|---|
Similarity: | 407/881 - (46%) | Gaps: | 107/881 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 152 CHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSII 216
Fly 217 NMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLR 281
Fly 282 LEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNL 346
Fly 347 TALKVLELDDNLISSLPEGLSKLSQLQELSITSNRLRWIND-----TELPRSMQMLDMRANPLST 406
Fly 407 ISPGAFRGMSKLRKLILSDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELK 471
Fly 472 TNSLKRIPNLSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQ 536
Fly 537 LLDLEGNEISYIHKEAFSGFTALEDLNLGNNIFPELPESGLRALLHLKTFNNPKLREFPPPDTFP 601
Fly 602 RIQTLILSYAYHCCAFLPLVAMSSQKKTSQVQEAVLFPSDAEFDMTLWNNSMMNIWPQMHNLSKQ 666
Fly 667 LGASMHDPWETAINFNEEQLQTQTGGQIATSYMEEYFEEHDVSGPATGYGFGTGLFSGMSTEDFQ 731
Fly 732 PGSVQCLPMPGPFLPCADLFDWWTLRCGVWVVFLLSLLGNGTVVFVLLCSRSKMDVPRFLVCNLA 796
Fly 797 AADFFMGIYLGILAIVDAATLGEFRMFAIPWQMSVLCQLSGFLAVLSSELSVYTLAVITLERNYA 861
Fly 862 ITHAIHLNKRLSLKQAGYIMSVGWVFALIMALMPLVGVSDYRKFAVCLPFETTTGPASLTYVISL 926
Fly 927 MFINGCAFLTLMGCYLKMYWAIRGSQAWNTNDSRIAKRMALLVFTDFLCWSPIAFFSITAIFGLQ 991
Fly 992 LISLEQAKIFTVFVLPLNSCCNPFLYAIMTKQFKKD 1027 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 8/20 (40%) |
LRR_RI | 180..>383 | CDD:238064 | 72/202 (36%) | ||
leucine-rich repeat | 183..204 | CDD:275380 | 7/20 (35%) | ||
LRR_8 | 203..263 | CDD:290566 | 26/59 (44%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 252..311 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 299..359 | CDD:290566 | 21/59 (36%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | 327..567 | CDD:238064 | 69/244 (28%) | ||
leucine-rich repeat | 349..371 | CDD:275380 | 6/21 (29%) | ||
LRR_8 | 370..425 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 372..393 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 394..415 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 418..486 | CDD:275380 | 18/67 (27%) | ||
leucine-rich repeat | 441..464 | CDD:275378 | 8/22 (36%) | ||
LRR_8 | 487..545 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 487..510 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 533..589 | CDD:290566 | 18/55 (33%) | ||
leucine-rich repeat | 535..558 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 559..580 | CDD:275380 | 5/20 (25%) | ||
7tm_4 | 764..>892 | CDD:304433 | 38/127 (30%) | ||
7tm_1 | 770..1017 | CDD:278431 | 74/246 (30%) | ||
Lgr4 | NP_775450.2 | LRRNT | 29..61 | CDD:214470 | 11/30 (37%) |
LRR 1 | 58..79 | 7/20 (35%) | |||
leucine-rich repeat | 59..82 | CDD:275380 | 7/22 (32%) | ||
LRR | <62..301 | CDD:227223 | 85/241 (35%) | ||
LRR 2 | 82..103 | 8/20 (40%) | |||
leucine-rich repeat | 83..106 | CDD:275380 | 10/22 (45%) | ||
LRR 3 | 106..127 | 8/20 (40%) | |||
leucine-rich repeat | 107..130 | CDD:275380 | 10/22 (45%) | ||
LRR 4 | 130..151 | 7/20 (35%) | |||
leucine-rich repeat | 131..154 | CDD:275380 | 8/22 (36%) | ||
LRR 5 | 154..177 | 7/22 (32%) | |||
leucine-rich repeat | 155..178 | CDD:275380 | 8/22 (36%) | ||
LRR 6 | 178..199 | 9/20 (45%) | |||
leucine-rich repeat | 179..202 | CDD:275380 | 8/22 (36%) | ||
LRR 7 | 202..223 | 7/20 (35%) | |||
leucine-rich repeat | 203..226 | CDD:275380 | 8/22 (36%) | ||
LRR 8 | 226..247 | 5/20 (25%) | |||
leucine-rich repeat | 227..249 | CDD:275380 | 6/21 (29%) | ||
LRR 9 | 249..270 | 7/20 (35%) | |||
leucine-rich repeat | 250..273 | CDD:275380 | 7/22 (32%) | ||
LRR 10 | 273..294 | 9/23 (39%) | |||
leucine-rich repeat | 274..295 | CDD:275380 | 8/23 (35%) | ||
LRR | 275..>465 | CDD:227223 | 60/216 (28%) | ||
LRR 11 | 320..341 | 8/20 (40%) | |||
leucine-rich repeat | 321..344 | CDD:275378 | 8/22 (36%) | ||
LRR 12 | 344..365 | 8/44 (18%) | |||
LRR_8 | 345..401 | CDD:404697 | 20/79 (25%) | ||
leucine-rich repeat | 345..366 | CDD:275378 | 8/44 (18%) | ||
LRR 13 | 366..387 | 5/20 (25%) | |||
leucine-rich repeat | 367..390 | CDD:275378 | 7/22 (32%) | ||
LRR 14 | 390..411 | 10/20 (50%) | |||
leucine-rich repeat | 391..414 | CDD:275378 | 10/22 (45%) | ||
LRR 15 | 414..435 | 5/20 (25%) | |||
leucine-rich repeat | 415..427 | CDD:275378 | 2/11 (18%) | ||
leucine-rich repeat | 436..461 | CDD:275380 | 7/24 (29%) | ||
7tmA_LGR4 | 539..812 | CDD:320483 | 87/274 (32%) | ||
TM helix 1 | 541..565 | CDD:320483 | 9/23 (39%) | ||
TM helix 2 | 574..595 | CDD:320483 | 6/20 (30%) | ||
TM helix 3 | 619..641 | CDD:320483 | 9/21 (43%) | ||
TM helix 4 | 664..680 | CDD:320483 | 1/15 (7%) | ||
TM helix 5 | 704..727 | CDD:320483 | 7/22 (32%) | ||
TM helix 6 | 746..768 | CDD:320483 | 9/21 (43%) | ||
TM helix 7 | 780..805 | CDD:320483 | 10/24 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 380 | 1.000 | Inparanoid score | I1993 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D171884at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45552 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106088 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2481 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.730 |