Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_937893.1 | Gene: | Lrrc4b / 272381 | MGIID: | 3027390 | Length: | 709 | Species: | Mus musculus |
Alignment Length: | 521 | Identity: | 121/521 - (23%) |
---|---|---|---|
Similarity: | 191/521 - (36%) | Gaps: | 158/521 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 290 IPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLEL 354
Fly 355 DDNLISSLP-EGLSKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKL 418
Fly 419 RKLILSDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSS 483
Fly 484 CRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYI 548
Fly 549 HKEAFSGFTALEDLNLGNNIFPELPESGLRALLHLKTFNNPKLREFPPPDTFPRIQTLILSYAYH 613
Fly 614 CCA-----------------------FLPLV-----------AMSSQKK----TSQVQEAVLFPS 640
Fly 641 DAEFDMTLWNNSMMNIWPQMHNLSKQLGASMHDPWETAINFNEEQLQ---------TQTGGQIAT 696
Fly 697 SYMEEYFEEHDVS-----GPATGYGFGTGLFSG--------MSTEDFQPGSVQCLPM------PG 742
Fly 743 P 743 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | |
LRR_RI | 180..>383 | CDD:238064 | 30/93 (32%) | ||
leucine-rich repeat | 183..204 | CDD:275380 | |||
LRR_8 | 203..263 | CDD:290566 | |||
leucine-rich repeat | 205..228 | CDD:275380 | |||
leucine-rich repeat | 229..252 | CDD:275380 | |||
LRR_8 | 252..311 | CDD:290566 | 7/20 (35%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | |||
leucine-rich repeat | 277..300 | CDD:275380 | 3/9 (33%) | ||
LRR_8 | 299..359 | CDD:290566 | 21/59 (36%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 9/22 (41%) | ||
LRR_RI | 327..567 | CDD:238064 | 67/240 (28%) | ||
leucine-rich repeat | 349..371 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 370..425 | CDD:290566 | 15/54 (28%) | ||
leucine-rich repeat | 372..393 | CDD:275380 | 4/20 (20%) | ||
leucine-rich repeat | 394..415 | CDD:275380 | 6/20 (30%) | ||
leucine-rich repeat | 418..486 | CDD:275380 | 18/67 (27%) | ||
leucine-rich repeat | 441..464 | CDD:275378 | 2/22 (9%) | ||
LRR_8 | 487..545 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 487..510 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 533..589 | CDD:290566 | 12/55 (22%) | ||
leucine-rich repeat | 535..558 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 559..580 | CDD:275380 | 5/20 (25%) | ||
7tm_4 | 764..>892 | CDD:304433 | |||
7tm_1 | 770..1017 | CDD:278431 | |||
Lrrc4b | NP_937893.1 | LRRNT | 59..92 | CDD:214470 | 3/12 (25%) |
LRR | <89..299 | CDD:227223 | 71/260 (27%) | ||
LRR 1 | 89..110 | 7/27 (26%) | |||
leucine-rich repeat | 90..113 | CDD:275380 | 6/29 (21%) | ||
LRR 2 | 113..134 | 8/20 (40%) | |||
leucine-rich repeat | 114..137 | CDD:275380 | 9/22 (41%) | ||
LRR 3 | 137..158 | 7/20 (35%) | |||
leucine-rich repeat | 138..161 | CDD:275380 | 8/22 (36%) | ||
LRR 4 | 161..182 | 10/42 (24%) | |||
leucine-rich repeat | 162..185 | CDD:275380 | 10/44 (23%) | ||
LRR 5 | 185..207 | 7/25 (28%) | |||
leucine-rich repeat | 186..210 | CDD:275380 | 9/45 (20%) | ||
LRR 6 | 210..231 | 9/20 (45%) | |||
leucine-rich repeat | 211..232 | CDD:275380 | 9/20 (45%) | ||
LRR 7 | 232..253 | 7/20 (35%) | |||
leucine-rich repeat | 233..256 | CDD:275380 | 9/22 (41%) | ||
LRR 8 | 256..277 | 5/20 (25%) | |||
leucine-rich repeat | 257..280 | CDD:275380 | 5/22 (23%) | ||
LRR 9 | 280..301 | 5/20 (25%) | |||
leucine-rich repeat | 281..302 | CDD:275380 | 5/20 (25%) | ||
LRRCT | 313..363 | CDD:214507 | 11/71 (15%) | ||
I-set | 366..455 | CDD:400151 | 18/106 (17%) | ||
Ig strand A | 366..369 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 373..376 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 382..389 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 395..400 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 403..405 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 414..418 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 421..425 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 435..442 | CDD:409353 | 0/6 (0%) | ||
Ig strand G | 445..455 | CDD:409353 | 2/9 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 496..552 | 7/20 (35%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |