DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and LRIG1

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_056356.2 Gene:LRIG1 / 26018 HGNCID:17360 Length:1093 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
LRIG1NP_056356.2 leucine-rich repeat 51..69 CDD:275380
LRR_RI <53..176 CDD:238064
leucine-rich repeat 70..93 CDD:275380
LRR_8 71..127 CDD:290566
leucine-rich repeat 117..140 CDD:275378
LRR_RI 131..416 CDD:238064
LRR_8 140..223 CDD:290566
leucine-rich repeat 141..164 CDD:275380
leucine-rich repeat 165..197 CDD:275380
LRR_8 211..271 CDD:290566
leucine-rich repeat 213..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
LRR_8 259..319 CDD:290566
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
LRR_8 308..367 CDD:290566
leucine-rich repeat 309..332 CDD:275380
leucine-rich repeat 333..356 CDD:275380
leucine-rich repeat 357..381 CDD:275380
LRR_8 383..442 CDD:290566
leucine-rich repeat 384..405 CDD:275380
leucine-rich repeat 408..431 CDD:275380
LRRCT 442..490 CDD:214507
I-set 495..595 CDD:254352
Ig 512..586 CDD:143165
I-set 599..689 CDD:254352
Ig_1 616..690 CDD:143240
I-set 693..780 CDD:254352
IGc2 707..770 CDD:197706
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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