| Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_037020.2 | Gene: | Tshr / 25360 | RGDID: | 3911 | Length: | 764 | Species: | Rattus norvegicus |
| Alignment Length: | 780 | Identity: | 251/780 - (32%) |
|---|---|---|---|
| Similarity: | 370/780 - (47%) | Gaps: | 138/780 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 341 GALKNLTALKVLELDDNLISSLPEGL---------SKLSQLQELSITSNRLRWINDTELPRSMQM 396
Fly 397 LDMRANPLSTISPGAFRGMSKLRKLILSDVRTLR-----SFPELEACHALEILKLDRAGIQEVPA 456
Fly 457 NLCRQTPRLKSLELKTNSLKRIPNLSS-----------------------------CRDLRLLDL 492
Fly 493 SSNQIEKIQGKPFNGLKQLNDLLLSYNR-IKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGF 556
Fly 557 TALEDLNLGNNIFPELPESGLRALLHLKTFNNPKLREFPPPDTFPRIQTLILSYAYHCCAFLPLV 621
Fly 622 AMSSQKKTSQVQEAVLFPSDAEFDMTLWNNSMMNIWPQMHNLSKQLGASMHDPWETAINFN---- 682
Fly 683 EEQLQTQTGGQIATSYMEEYFEEHDVSGPATGYGFGTGLFSGMSTEDFQP-------------GS 734
Fly 735 VQCLPMPGPFLPCADLFDWWTLRCGVWVVFLLSLLGNGTVVFVLLCSRSKMDVPRFLVCNLAAAD 799
Fly 800 FFMGIYLGILAIVDAATLGEFRMFAIPWQMSVLCQLSGFLAVLSSELSVYTLAVITLERNYAITH 864
Fly 865 AIHLNKRLSLKQAGYIMSVGWVFALIMALMPLVGVSDYRKFAVCLPFETTTGPASLTYVISLMFI 929
Fly 930 NGCAFLTLMGCYLKMYWAIRGSQAWN--TNDSRIAKRMALLVFTDFLCWSPIAFFSITAIFGLQL 992
Fly 993 ISLEQAKIFTVFVLPLNSCCNPFLYAIMTKQFKKDCVT------LCKH----FEESRVVGGGGPG 1047
Fly 1048 1047 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | |
| LRR_RI | 180..>383 | CDD:238064 | 10/50 (20%) | ||
| leucine-rich repeat | 183..204 | CDD:275380 | |||
| LRR_8 | 203..263 | CDD:290566 | |||
| leucine-rich repeat | 205..228 | CDD:275380 | |||
| leucine-rich repeat | 229..252 | CDD:275380 | |||
| LRR_8 | 252..311 | CDD:290566 | |||
| leucine-rich repeat | 253..276 | CDD:275380 | |||
| leucine-rich repeat | 277..300 | CDD:275380 | |||
| LRR_8 | 299..359 | CDD:290566 | 4/17 (24%) | ||
| leucine-rich repeat | 301..324 | CDD:275380 | |||
| leucine-rich repeat | 325..348 | CDD:275380 | 3/6 (50%) | ||
| LRR_RI | 327..567 | CDD:238064 | 61/269 (23%) | ||
| leucine-rich repeat | 349..371 | CDD:275380 | 4/30 (13%) | ||
| LRR_8 | 370..425 | CDD:290566 | 15/54 (28%) | ||
| leucine-rich repeat | 372..393 | CDD:275380 | 5/20 (25%) | ||
| leucine-rich repeat | 394..415 | CDD:275380 | 7/20 (35%) | ||
| leucine-rich repeat | 418..486 | CDD:275380 | 17/101 (17%) | ||
| leucine-rich repeat | 441..464 | CDD:275378 | 2/22 (9%) | ||
| LRR_8 | 487..545 | CDD:290566 | 18/58 (31%) | ||
| leucine-rich repeat | 487..510 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 511..534 | CDD:275380 | 8/23 (35%) | ||
| LRR_8 | 533..589 | CDD:290566 | 11/55 (20%) | ||
| leucine-rich repeat | 535..558 | CDD:275380 | 2/22 (9%) | ||
| leucine-rich repeat | 559..580 | CDD:275380 | 5/20 (25%) | ||
| 7tm_4 | 764..>892 | CDD:304433 | 68/127 (54%) | ||
| 7tm_1 | 770..1017 | CDD:278431 | 121/248 (49%) | ||
| Tshr | NP_037020.2 | leucine-rich repeat | 54..77 | CDD:275380 | 7/22 (32%) |
| LRR_5 | 65..221 | CDD:404228 | 36/158 (23%) | ||
| leucine-rich repeat | 78..102 | CDD:275380 | 7/23 (30%) | ||
| LRR 1 | 100..124 | 3/25 (12%) | |||
| leucine-rich repeat | 103..127 | CDD:275380 | 2/25 (8%) | ||
| LRR 2 | 125..150 | 7/24 (29%) | |||
| leucine-rich repeat | 128..177 | CDD:275380 | 6/48 (13%) | ||
| LRR 3 | 151..174 | 0/22 (0%) | |||
| LRR 4 | 176..199 | 8/22 (36%) | |||
| leucine-rich repeat | 180..201 | CDD:275380 | 9/20 (45%) | ||
| LRR 5 | 201..223 | 8/22 (36%) | |||
| leucine-rich repeat | 202..229 | CDD:275380 | 10/46 (22%) | ||
| LRR 6 | 225..248 | 8/25 (32%) | |||
| leucine-rich repeat | 230..251 | CDD:275380 | 6/23 (26%) | ||
| LRR 7 | 264..288 | 10/29 (34%) | |||
| 7tmA_TSH-R | 415..689 | CDD:320630 | 136/275 (49%) | ||
| TM helix 1 | 417..441 | CDD:320630 | 14/23 (61%) | ||
| TM helix 2 | 450..471 | CDD:320630 | 14/20 (70%) | ||
| TM helix 3 | 495..517 | CDD:320630 | 13/21 (62%) | ||
| TM helix 4 | 540..556 | CDD:320630 | 7/15 (47%) | ||
| TM helix 5 | 580..603 | CDD:320630 | 7/22 (32%) | ||
| TM helix 6 | 623..645 | CDD:320630 | 14/21 (67%) | ||
| TM helix 7 | 657..682 | CDD:320630 | 15/24 (63%) | ||
| PDZ-binding | 762..764 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||