DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and Lrrc15

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_659551.1 Gene:Lrrc15 / 246296 RGDID:70551 Length:578 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
Lrrc15NP_659551.1 LRR_8 54..113 CDD:290566
LRR 1 54..75
LRR 2 78..99
leucine-rich repeat 79..102 CDD:275380
LRR_RI <94..303 CDD:238064
LRR_8 102..161 CDD:290566
LRR 3 102..123
leucine-rich repeat 103..126 CDD:275380
LRR 4 126..147
leucine-rich repeat 127..150 CDD:275380
LRR_8 149..209 CDD:290566
LRR 5 150..171
leucine-rich repeat 151..174 CDD:275380
LRR 6 174..195
leucine-rich repeat 175..198 CDD:275380
LRR_8 198..257 CDD:290566
LRR 7 198..219
leucine-rich repeat 199..222 CDD:275380
LRR 8 222..243
leucine-rich repeat 223..246 CDD:275380
LRR_8 245..305 CDD:290566
LRR 9 246..267
leucine-rich repeat 247..270 CDD:275380
LRR 10 270..291
leucine-rich repeat 271..294 CDD:275380
LRR_8 293..353 CDD:290566
LRR 11 294..315
leucine-rich repeat 295..318 CDD:275380
LRR_4 318..358 CDD:289563
LRR 12 318..339
leucine-rich repeat 319..342 CDD:275380
LRR 13 342..363
leucine-rich repeat 343..364 CDD:275380
LRR_8 366..424 CDD:290566
LRR 14 366..387
leucine-rich repeat 367..387 CDD:275380
LRR 15 390..411
leucine-rich repeat 391..412 CDD:275380
TPKR_C2 423..>462 CDD:301599
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..500
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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