| Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_510425.2 | Gene: | let-4 / 181554 | WormBaseID: | WBGene00002282 | Length: | 773 | Species: | Caenorhabditis elegans |
| Alignment Length: | 636 | Identity: | 148/636 - (23%) |
|---|---|---|---|
| Similarity: | 257/636 - (40%) | Gaps: | 102/636 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 164 SCRGIGILAVPVNLPNEVVVLDLGNNN---LTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYG 225
Fly 226 LAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRI 290
Fly 291 PTNALAGLRTLEALNLGSNLLTIINDED-FPRMPNLIVLLLKRNQIMKISAGALKNL-TALKVLE 353
Fly 354 LDDNLISSLP-EGLSKLSQLQELSITSNRLRW---INDTELPRSMQMLDMRANPLSTISPGAFRG 414
Fly 415 MSKLRKLILS--DVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKR 477
Fly 478 I-PNLSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLE 541
Fly 542 GNEISYIHKEAFSGFTALEDLNLGNNIFPELPESGLRA---LLHLKTFNNP-------------- 589
Fly 590 --------------KLREFPPPDTFPRIQTLILSYAYHCCAFLPLVAMSSQKKTSQVQEAVLFPS 640
Fly 641 DAEFDMTLWNNSMMNIWPQMHN---LSKQLGASMHDPWETAINFNEEQLQTQ------TGGQIAT 696
Fly 697 SYMEEYFEEHDVSGPATGYGFGTGLFSGMSTEDF--QPGSVQCLPMPGPFL 745 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 3/14 (21%) |
| LRR_RI | 180..>383 | CDD:238064 | 50/208 (24%) | ||
| leucine-rich repeat | 183..204 | CDD:275380 | 4/23 (17%) | ||
| LRR_8 | 203..263 | CDD:290566 | 13/59 (22%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 252..311 | CDD:290566 | 14/58 (24%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 0/22 (0%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 10/22 (45%) | ||
| LRR_8 | 299..359 | CDD:290566 | 15/61 (25%) | ||
| leucine-rich repeat | 301..324 | CDD:275380 | 7/23 (30%) | ||
| leucine-rich repeat | 325..348 | CDD:275380 | 6/23 (26%) | ||
| LRR_RI | 327..567 | CDD:238064 | 64/247 (26%) | ||
| leucine-rich repeat | 349..371 | CDD:275380 | 4/22 (18%) | ||
| LRR_8 | 370..425 | CDD:290566 | 18/59 (31%) | ||
| leucine-rich repeat | 372..393 | CDD:275380 | 8/23 (35%) | ||
| leucine-rich repeat | 394..415 | CDD:275380 | 4/20 (20%) | ||
| leucine-rich repeat | 418..486 | CDD:275380 | 20/70 (29%) | ||
| leucine-rich repeat | 441..464 | CDD:275378 | 8/22 (36%) | ||
| LRR_8 | 487..545 | CDD:290566 | 18/57 (32%) | ||
| leucine-rich repeat | 487..510 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 511..534 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 533..589 | CDD:290566 | 15/58 (26%) | ||
| leucine-rich repeat | 535..558 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 559..580 | CDD:275380 | 6/23 (26%) | ||
| 7tm_4 | 764..>892 | CDD:304433 | |||
| 7tm_1 | 770..1017 | CDD:278431 | |||
| let-4 | NP_510425.2 | leucine-rich repeat | 66..86 | CDD:275380 | 6/19 (32%) |
| LRR_RI | <71..275 | CDD:238064 | 57/229 (25%) | ||
| LRR_8 | 88..146 | CDD:290566 | 20/80 (25%) | ||
| leucine-rich repeat | 88..111 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 112..135 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 136..160 | CDD:275380 | 7/23 (30%) | ||
| LRR_8 | 156..220 | CDD:290566 | 16/63 (25%) | ||
| leucine-rich repeat | 161..184 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 186..209 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 210..257 | CDD:275380 | 12/47 (26%) | ||
| LRR_RI | <250..411 | CDD:238064 | 45/161 (28%) | ||
| LRR_8 | 256..316 | CDD:290566 | 18/60 (30%) | ||
| leucine-rich repeat | 258..281 | CDD:275380 | 6/23 (26%) | ||
| leucine-rich repeat | 282..305 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 306..328 | CDD:275380 | 6/21 (29%) | ||
| LRR_8 | 327..387 | CDD:290566 | 18/59 (31%) | ||
| leucine-rich repeat | 329..350 | CDD:275380 | 5/20 (25%) | ||
| leucine-rich repeat | 353..400 | CDD:275380 | 13/46 (28%) | ||
| leucine-rich repeat | 356..376 | CDD:275380 | 5/19 (26%) | ||
| leucine-rich repeat | 401..419 | CDD:275380 | 6/17 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||