Protein Alignment rk and Nmbr

DIOPT Version :9

• Sequence 1: NP_476702.1
• Gene: rk / 34819
• FlyBaseID: FBgn0003255
• Length: 1360
• Species: Drosophila melanogaster
• Sequence 2: NP_032729.1
• Gene: Nmbr / 18101
• MGIID: 1100525
• Length: 390
• Species: Mus musculus
• Alignment Length: 353
• Identity: 74/353 - (20%)
• Similarity: 134/353 - (37%)
• Gaps: 75/353 - (21%)

  Fly   728 EDFQPGS--------VQCLPMPGPFLPCADLFDWWTLRCGVWVVFLLSLLGNGTVVFVLLCSRSK 784
            :||.|.|        ::|: :|..:|                ::..:.||||..:|.:.|.:.:.
Mouse    27 KDFLPDSDGTTAELVIRCV-IPSLYL----------------IIISVGLLGNIMLVKIFLTNSAM 74

  Fly   785 MDVPRFLVCNLAAADFFMGIYLGILAIVDAATLGEFRMFAIPWQMSVL-CQLSGFLAVLSSELSV 848
            .:||...:.||||.|        :|.::....:...|.|...|....| |:|...:.:.|..:||
Mouse    75 RNVPNIFISNLAAGD--------LLLLLTCVPVDASRYFFDEWVFGKLGCKLIPAIQLTSVGVSV 131

  Fly   849 YTLAVITLERNYAITHAIHLNKR-----LSLKQAGYIMSVGWVFALIMAL-------MPLVGVSD 901
            :||..::.:|..||.:.:.:...     .|||..|.     ||.::::|:       :..:|..|
Mouse   132 FTLTALSADRYRAIVNPMDMQTSGVLLWTSLKAVGI-----WVVSVLLAVPEAVFSEVARIGSLD 191

  Fly   902 YRKFAVCLPFETTTGPASLTYVISLMFINGCAFLTLMGCY--------LKMYWAIRGSQAWNTND 958
            ...|..|:|:..|.......:.:.:..:.....|.::..|        :|....:.|....:|..
Mouse   192 NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLVIISIYYYHIAKTLIKSAHNLPGEYNEHTKK 256

  Fly   959 -----SRIAKRMALLVFTDFLCWSPIAFFSITAIFGLQLISLEQAKIFTVFVLPL----NSCCNP 1014
                 .|:||.:.:.|.....||.|.....:...|..:.|......:....|..:    |||.||
Mouse   257 QMETRKRLAKIVLVFVGCFVFCWFPNHVLYLYRSFNYKEIDPSLGHMIVTLVARVLSFSNSCVNP 321

  Fly  1015 FLYAIMTKQFKKDCVTLCKHFEESRVVG 1042
            |...::::.|:       |||......|
Mouse   322 FALYLLSESFR-------KHFNSQLCCG 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rk	NP_476702.1	leucine-rich repeat	158..179	CDD:275380
		LRR_RI	180..>383	CDD:238064
		leucine-rich repeat	183..204	CDD:275380
		LRR_8	203..263	CDD:290566
		leucine-rich repeat	205..228	CDD:275380
		leucine-rich repeat	229..252	CDD:275380
		LRR_8	252..311	CDD:290566
		leucine-rich repeat	253..276	CDD:275380
		leucine-rich repeat	277..300	CDD:275380
		LRR_8	299..359	CDD:290566
		leucine-rich repeat	301..324	CDD:275380
		leucine-rich repeat	325..348	CDD:275380
		LRR_RI	327..567	CDD:238064
		leucine-rich repeat	349..371	CDD:275380
		LRR_8	370..425	CDD:290566
		leucine-rich repeat	372..393	CDD:275380
		leucine-rich repeat	394..415	CDD:275380
		leucine-rich repeat	418..486	CDD:275380
		leucine-rich repeat	441..464	CDD:275378
		LRR_8	487..545	CDD:290566
		leucine-rich repeat	487..510	CDD:275380
		leucine-rich repeat	511..534	CDD:275380
		LRR_8	533..589	CDD:290566
		leucine-rich repeat	535..558	CDD:275380
		leucine-rich repeat	559..580	CDD:275380
		7tm_4	764..>892	CDD:304433	34/133 (26%)
		7tm_1	770..1017	CDD:278431	60/276 (22%)
Nmbr	NP_032729.1	7tm_1	60..322	CDD:278431	58/274 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910