| Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_499896.1 | Gene: | sma-10 / 176849 | WormBaseID: | WBGene00020649 | Length: | 881 | Species: | Caenorhabditis elegans |
| Alignment Length: | 599 | Identity: | 150/599 - (25%) |
|---|---|---|---|
| Similarity: | 250/599 - (41%) | Gaps: | 117/599 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 152 CHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEAN---SFFMAPNLEELTLSDN 213
Fly 214 SIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLR 278
Fly 279 TLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGAL 343
Fly 344 KNLTALKVLELDDNLISSLPEGLSKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTIS 408
Fly 409 PGAFRGMSKLRKLILSDVRTLRSFPE--LEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELK 471
Fly 472 TNSLKRIPNLSSCRDLRLLD---LSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAF---- 529
Fly 530 QGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLGNN----IFPELPESGLRALLHLK--TFNN 588
Fly 589 PKLR--------------------------EFPPPDTFPRIQTLILSYAYHCCAFLPLVAMSSQK 627
Fly 628 KT------------SQVQEAVLFPSDAEFDMTLWNNSMMNI-WPQMHN----LSKQLGASMHDPW 675
Fly 676 ETAI---NFNEEQL 686 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 2/20 (10%) |
| LRR_RI | 180..>383 | CDD:238064 | 51/205 (25%) | ||
| leucine-rich repeat | 183..204 | CDD:275380 | 4/23 (17%) | ||
| LRR_8 | 203..263 | CDD:290566 | 20/59 (34%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 252..311 | CDD:290566 | 16/58 (28%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 299..359 | CDD:290566 | 19/59 (32%) | ||
| leucine-rich repeat | 301..324 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 325..348 | CDD:275380 | 7/22 (32%) | ||
| LRR_RI | 327..567 | CDD:238064 | 69/248 (28%) | ||
| leucine-rich repeat | 349..371 | CDD:275380 | 5/21 (24%) | ||
| LRR_8 | 370..425 | CDD:290566 | 11/54 (20%) | ||
| leucine-rich repeat | 372..393 | CDD:275380 | 3/20 (15%) | ||
| leucine-rich repeat | 394..415 | CDD:275380 | 4/20 (20%) | ||
| leucine-rich repeat | 418..486 | CDD:275380 | 21/69 (30%) | ||
| leucine-rich repeat | 441..464 | CDD:275378 | 7/22 (32%) | ||
| LRR_8 | 487..545 | CDD:290566 | 18/64 (28%) | ||
| leucine-rich repeat | 487..510 | CDD:275380 | 8/25 (32%) | ||
| leucine-rich repeat | 511..534 | CDD:275380 | 6/26 (23%) | ||
| LRR_8 | 533..589 | CDD:290566 | 23/61 (38%) | ||
| leucine-rich repeat | 535..558 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 559..580 | CDD:275380 | 9/24 (38%) | ||
| 7tm_4 | 764..>892 | CDD:304433 | |||
| 7tm_1 | 770..1017 | CDD:278431 | |||
| sma-10 | NP_499896.1 | LRRNT | 29..54 | CDD:214470 | 8/28 (29%) |
| leucine-rich repeat | 55..77 | CDD:275380 | 4/21 (19%) | ||
| LRR_8 | 78..135 | CDD:290566 | 20/57 (35%) | ||
| LRR_4 | 78..116 | CDD:289563 | 13/37 (35%) | ||
| leucine-rich repeat | 78..101 | CDD:275380 | 9/22 (41%) | ||
| LRR_RI | 100..303 | CDD:238064 | 56/225 (25%) | ||
| leucine-rich repeat | 102..124 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 125..148 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 149..172 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 172..231 | CDD:290566 | 19/58 (33%) | ||
| leucine-rich repeat | 173..196 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 197..220 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 221..244 | CDD:275380 | 8/43 (19%) | ||
| LRR_8 | 243..303 | CDD:290566 | 16/61 (26%) | ||
| leucine-rich repeat | 245..268 | CDD:275380 | 4/22 (18%) | ||
| LRR_RI | 269..453 | CDD:238064 | 59/190 (31%) | ||
| leucine-rich repeat | 269..292 | CDD:275380 | 6/23 (26%) | ||
| leucine-rich repeat | 293..316 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 315..373 | CDD:290566 | 21/58 (36%) | ||
| leucine-rich repeat | 317..340 | CDD:275380 | 9/23 (39%) | ||
| leucine-rich repeat | 341..364 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 365..392 | CDD:275380 | 6/26 (23%) | ||
| LRR_8 | 393..450 | CDD:290566 | 22/61 (36%) | ||
| leucine-rich repeat | 393..416 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 417..438 | CDD:275380 | 9/25 (36%) | ||
| I-set | 506..612 | CDD:254352 | 16/69 (23%) | ||
| Ig | 522..606 | CDD:143165 | 14/53 (26%) | ||
| I-set | 616..705 | CDD:254352 | |||
| Ig | 633..705 | CDD:299845 | |||
| Ig | 716..786 | CDD:299845 | |||
| IG | 719..788 | CDD:214652 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||