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Protein Alignment rk and C06A8.6

DIOPT Version :9

Sequence 1:	NP_476702.1	Gene:	rk / 34819	FlyBaseID:	FBgn0003255	Length:	1360	Species:	Drosophila melanogaster
Sequence 2:	NP_495634.1	Gene:	C06A8.6 / 174253	WormBaseID:	WBGene00015516	Length:	349	Species:	Caenorhabditis elegans

Alignment Length:	327	Identity:	73/327 - (22%)
Similarity:	125/327 - (38%)	Gaps:	71/327 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   227 AKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDG-DCLGHLQKLRTLRLEGNLFYR- 289
            |..|.:.|....:|.:...|:  |..:.......|.:..::. |||..|..|.        ||.
Worm    32 ADAKNVDLTRHRIKEIGDYSW--LTHVEHFSFRWNLIKKIENLDCLTTLTHLE--------FYDN 86

  Fly   290 --IPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVL 352
              .....|..|..||:|:|..|.:|.|  |:..::..|..|....|:|.||.  .|..||.|:.|
Worm    87 QITKVENLDSLVNLESLDLSFNRITKI--ENLEKLTKLKTLFFVHNKITKIE--GLDTLTELEYL 147

  Fly   353 ELDDNLISSLPEGLSKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSK 417
            ||.||.|:.: |.|....:|..|.:.:|::|.|.:.:..:.:.:|.:.||.::.:.
Worm   148 ELGDNRIAKI-ENLDNNLKLDRLFLGANQIRLIENVDHLKKLTVLSLPANAITVVD--------- 202

  Fly   418 LRKLILSDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLS 482
                            .:...|                        .||.:.|..|.:|.:..:.
Worm   203 ----------------NISGLH------------------------NLKEIYLAQNGIKYVCGID 227

  Fly   483 SCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALP-QDAFQGIPKLQLLDLEGNEIS 546
            ....|.:||.:.|::||::.  .:.||.|.|.....|::.... .|....:|:|..:.|:.|.|:
Worm   228 EHLPLEILDFNQNRLEKVEN--IHQLKTLTDFWARGNKLDNWSIMDELVELPQLNSVYLDFNPIA 290

  Fly   547 YI 548
            .:
Worm   291 SV 292

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.