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Protein Alignment rk and Lum

DIOPT Version :9

Sequence 1:	NP_476702.1	Gene:	rk / 34819	FlyBaseID:	FBgn0003255	Length:	1360	Species:	Drosophila melanogaster
Sequence 2:	NP_032550.2	Gene:	Lum / 17022	MGIID:	109347	Length:	338	Species:	Mus musculus

Alignment Length:	291	Identity:	87/291 - (29%)
Similarity:	135/291 - (46%)	Gaps:	43/291 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   323 PNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLI-SSLPEG--LSKLSQLQELSITSNRLRW 384
            |.:..|.|:.|||..|...|.:|:|.|:.|.||.||: :|..:|  .|||.||::|.|..|.|
Mouse    66 PGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGKVFSKLKQLKKLHINYNNL-- 128

  Fly   385 INDTE----LPRSMQMLDMRANPLSTISPGAFRGMSKLRKLIL--SDVRTLRSFPELEACHALEI 443
               ||    ||:|:|.|.:..|.:|.:  |:|.|:..|..:.|  :.::.......|:...:||.
Mouse   129 ---TESVGPLPKSLQDLQLTNNKISKL--GSFDGLVNLTFIYLQHNQLKEDAVSASLKGLKSLEY 188

  Fly   444 LKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPN--LSSCRDLRLLDLSSNQI--EKIQGKP 504
            |.|....:.::||.|   ...|.:|.|..|.:..||:  ......|:.|.||.|::  ..:.|..
Mouse   189 LDLSFNQMSKLPAGL---PTSLLTLYLDNNKISNIPDEYFKRFTGLQYLRLSHNELADSGVPGNS 250

  Fly   505 FNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLGNNIF 569
            || :..|.:|.||||::|::|...    ..|:...||.||:.....::|.            .|.
Mouse   251 FN-ISSLLELDLSYNKLKSIPTVN----ENLENYYLEVNELEKFDVKSFC------------KIL 298

  Fly   570 PELPESGLRALLHLKTFNNPKLREFPPPDTF 600
            ..|..|.::   ||:...||..:...|||.:
Mouse   299 GPLSYSKIK---HLRLDGNPLTQSSLPPDMY 326

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.