DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rk and Igfals

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_001351825.1 Gene:Igfals / 16005 MGIID:107973 Length:638 Species:Mus musculus


Alignment Length:541 Identity:152/541 - (28%)
Similarity:225/541 - (41%) Gaps:70/541 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SADPEKEAQILYEKSLQEYHGSQLSTASTATDVIAGKRTLHSICERWLQKHCHCTGSLEVLRLSC 165
            |:.|....|.|.........||.|  .|.....:.|.:.|:         |.|    ||...|..
Mouse   122 SSIPSAAFQNLSSLDFLNLQGSWL--RSLEPQALLGLQNLY---------HLH----LERNLLRS 171

  Fly   166 RGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLK 230
            ...|:.....:|.:    |.||||.|.:||...|....:|.:|.|..||::.:....|.||..|.
Mouse   172 LAAGLFRHTPSLAS----LSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLH 232

  Fly   231 RLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNAL 295
            .|.|....|..|.|....||.:|..|.|:.|||.|:..:...||.:|:.|.|:.||...:...|.
Mouse   233 ELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAF 297

  Fly   296 AGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLIS 360
            .|::.|..|:|..|.:..:.::.||.:..|.||.|..|.|..:.....|:|..|:.|:|..|.|.
Mouse   298 LGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIR 362

  Fly   361 SLPE-GLSKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILS 424
            .|.| ....|.||:.|::..|::.                      .:..|||.|:..:..:.||
Mouse   363 QLGEKTFEGLGQLEVLTLNDNQIH----------------------EVKVGAFFGLFNVAVMNLS 405

  Fly   425 DVRTLRSFPE--LEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRI--PNLSSCR 485
            . ..|||.||  .:....|..|.|:.:.:..:..:.......|:.|.|:.||:..|  .:|:...
Mouse   406 G-NCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLS 469

  Fly   486 DLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHK 550
            :|..|||::||:..:..:.|.||.||..||||.|::..|.:|....:.:...|||..|.:....:
Mouse   470 ELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAE 534

  Fly   551 EAFSGFTALEDLNLGNNIFPE-LPESGLRALLHLKTFNNP--------KLREF--PPPDTFPR-I 603
            ..||....|..|||.||.... :|:.||.   .|....||        .||:|  ..|...|| :
Mouse   535 GLFSSLGRLRYLNLRNNSLQTFVPQPGLE---RLWLDANPWDCSCPLKALRDFALQNPGVVPRFV 596

  Fly   604 QTL--------ILSYAYHCCA 616
            ||:        :.:|....||
Mouse   597 QTVCEGDDCQPVYTYNNITCA 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380 5/20 (25%)
LRR_RI 180..>383 CDD:238064 67/203 (33%)
leucine-rich repeat 183..204 CDD:275380 9/20 (45%)
LRR_8 203..263 CDD:290566 20/59 (34%)
leucine-rich repeat 205..228 CDD:275380 8/22 (36%)
leucine-rich repeat 229..252 CDD:275380 8/22 (36%)
LRR_8 252..311 CDD:290566 20/58 (34%)
leucine-rich repeat 253..276 CDD:275380 9/22 (41%)
leucine-rich repeat 277..300 CDD:275380 7/22 (32%)
LRR_8 299..359 CDD:290566 18/59 (31%)
leucine-rich repeat 301..324 CDD:275380 6/22 (27%)
leucine-rich repeat 325..348 CDD:275380 8/22 (36%)
LRR_RI 327..567 CDD:238064 68/244 (28%)
leucine-rich repeat 349..371 CDD:275380 8/22 (36%)
LRR_8 370..425 CDD:290566 9/54 (17%)
leucine-rich repeat 372..393 CDD:275380 3/20 (15%)
leucine-rich repeat 394..415 CDD:275380 3/20 (15%)
leucine-rich repeat 418..486 CDD:275380 17/71 (24%)
leucine-rich repeat 441..464 CDD:275378 3/22 (14%)
LRR_8 487..545 CDD:290566 22/57 (39%)
leucine-rich repeat 487..510 CDD:275380 9/22 (41%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
LRR_8 533..589 CDD:290566 16/56 (29%)
leucine-rich repeat 535..558 CDD:275380 6/22 (27%)
leucine-rich repeat 559..580 CDD:275380 9/21 (43%)
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
IgfalsNP_001351825.1 LRRNT 75..113 CDD:214470
leucine-rich repeat 92..110 CDD:275380
PLN00113 96..>558 CDD:331614 135/477 (28%)
leucine-rich repeat 114..134 CDD:275380 4/11 (36%)
leucine-rich repeat 135..158 CDD:275380 5/24 (21%)
leucine-rich repeat 159..182 CDD:275380 7/35 (20%)
leucine-rich repeat 183..206 CDD:275380 10/26 (38%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..254 CDD:275380 8/22 (36%)
leucine-rich repeat 255..278 CDD:275380 9/22 (41%)
leucine-rich repeat 279..302 CDD:275380 7/22 (32%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 8/22 (36%)
leucine-rich repeat 351..374 CDD:275380 8/22 (36%)
leucine-rich repeat 375..396 CDD:275380 6/42 (14%)
leucine-rich repeat 423..446 CDD:275380 3/22 (14%)
leucine-rich repeat 447..470 CDD:275380 7/22 (32%)
leucine-rich repeat 471..494 CDD:275380 9/22 (41%)
leucine-rich repeat 495..516 CDD:275380 8/20 (40%)
leucine-rich repeat 519..542 CDD:275380 6/22 (27%)
leucine-rich repeat 543..561 CDD:275380 7/17 (41%)
TPKR_C2 570..613 CDD:326558 11/42 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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