| Sequence 1: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001245211.1 | Gene: | LINGO2 / 158038 | HGNCID: | 21207 | Length: | 606 | Species: | Homo sapiens |
| Alignment Length: | 539 | Identity: | 138/539 - (25%) |
|---|---|---|---|
| Similarity: | 223/539 - (41%) | Gaps: | 83/539 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 152 CHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSII 216
Fly 217 NMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLR 281
Fly 282 LEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNL 346
Fly 347 TALKVLELDD-NLISSLPEGLSKLSQLQELSITSNRLRWINDTELPRSMQM--LDMRANPLSTIS 408
Fly 409 PGAFRGMSKLRKL--ILSDVRTL--RSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLE 469
Fly 470 LKTNSLKRIPNLSSCRDLRLLDLSSNQ-----------------IEKIQGKPFNGL--------- 508
Fly 509 ------KQLNDLLLSYNRIKAL-------PQDAFQGI-PKLQLLDLEGN-----------EISYI 548
Fly 549 HKEAFSGFTALEDLNLGNNIF-PELPESGL---------RALLHLKTFNNPKLREFPPPDTFP-R 602
Fly 603 IQTLILSYAYHCCAFLPLV 621 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | 4/20 (20%) |
| LRR_RI | 180..>383 | CDD:238064 | 71/203 (35%) | ||
| leucine-rich repeat | 183..204 | CDD:275380 | 6/20 (30%) | ||
| LRR_8 | 203..263 | CDD:290566 | 27/59 (46%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 13/22 (59%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 9/22 (41%) | ||
| LRR_8 | 252..311 | CDD:290566 | 18/58 (31%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 299..359 | CDD:290566 | 21/60 (35%) | ||
| leucine-rich repeat | 301..324 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 325..348 | CDD:275380 | 9/22 (41%) | ||
| LRR_RI | 327..567 | CDD:238064 | 61/297 (21%) | ||
| leucine-rich repeat | 349..371 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 370..425 | CDD:290566 | 15/58 (26%) | ||
| leucine-rich repeat | 372..393 | CDD:275380 | 5/20 (25%) | ||
| leucine-rich repeat | 394..415 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 418..486 | CDD:275380 | 14/71 (20%) | ||
| leucine-rich repeat | 441..464 | CDD:275378 | 3/22 (14%) | ||
| LRR_8 | 487..545 | CDD:290566 | 16/108 (15%) | ||
| leucine-rich repeat | 487..510 | CDD:275380 | 7/54 (13%) | ||
| leucine-rich repeat | 511..534 | CDD:275380 | 6/30 (20%) | ||
| LRR_8 | 533..589 | CDD:290566 | 11/76 (14%) | ||
| leucine-rich repeat | 535..558 | CDD:275380 | 3/33 (9%) | ||
| leucine-rich repeat | 559..580 | CDD:275380 | 6/30 (20%) | ||
| 7tm_4 | 764..>892 | CDD:304433 | |||
| 7tm_1 | 770..1017 | CDD:278431 | |||
| LINGO2 | NP_001245211.1 | LRRNT | 27..60 | CDD:214470 | 9/29 (31%) |
| leucine-rich repeat | 39..57 | CDD:275380 | 4/17 (24%) | ||
| LRR 1 | 58..79 | 7/20 (35%) | |||
| leucine-rich repeat | 59..82 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 60..117 | CDD:316378 | 23/56 (41%) | ||
| LRR 2 | 82..103 | 12/20 (60%) | |||
| leucine-rich repeat | 83..106 | CDD:275380 | 13/22 (59%) | ||
| LRR_8 | 106..165 | CDD:316378 | 19/58 (33%) | ||
| LRR 3 | 106..127 | 7/20 (35%) | |||
| leucine-rich repeat | 107..130 | CDD:275380 | 9/22 (41%) | ||
| LRR 4 | 130..151 | 6/20 (30%) | |||
| leucine-rich repeat | 131..154 | CDD:275380 | 7/22 (32%) | ||
| LRR_5 | 146..276 | CDD:331043 | 36/129 (28%) | ||
| LRR 5 | 154..175 | 5/20 (25%) | |||
| leucine-rich repeat | 155..178 | CDD:275380 | 7/22 (32%) | ||
| LRR 6 | 178..199 | 7/20 (35%) | |||
| leucine-rich repeat | 179..202 | CDD:275380 | 7/22 (32%) | ||
| LRR 7 | 202..223 | 7/20 (35%) | |||
| leucine-rich repeat | 203..250 | CDD:275380 | 16/46 (35%) | ||
| LRR 8 | 226..247 | 7/20 (35%) | |||
| LRR_8 | 250..309 | CDD:316378 | 15/58 (26%) | ||
| LRR 9 | 250..271 | 5/20 (25%) | |||
| leucine-rich repeat | 251..274 | CDD:275380 | 5/22 (23%) | ||
| LRR 10 | 274..295 | 8/20 (40%) | |||
| leucine-rich repeat | 275..298 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 298..357 | CDD:316378 | 12/61 (20%) | ||
| LRR 11 | 298..319 | 6/23 (26%) | |||
| leucine-rich repeat | 299..322 | CDD:275380 | 6/25 (24%) | ||
| LRR 12 | 322..343 | 3/20 (15%) | |||
| leucine-rich repeat | 323..343 | CDD:275380 | 3/19 (16%) | ||
| PCC | 327..>391 | CDD:188093 | 12/71 (17%) | ||
| I-set | 410..500 | CDD:254352 | 15/89 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||