DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and CPN2

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_001073982.3 Gene:CPN2 / 1370 HGNCID:2313 Length:545 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433
7tm_1 770..1017 CDD:278431
CPN2NP_001073982.3 LRRNT 21..53 CDD:214470
leucine-rich repeat 30..53 CDD:275380
leucine-rich repeat 75..98 CDD:275380
LRR 1 98..119
leucine-rich repeat 99..122 CDD:275380
LRR_8 121..181 CDD:290566
LRR 2 122..143
leucine-rich repeat 123..146 CDD:275380
LRR 3 146..167
leucine-rich repeat 147..170 CDD:275380
LRR_RI 149..>356 CDD:238064
LRR_8 169..229 CDD:290566
LRR 4 170..191
leucine-rich repeat 171..194 CDD:275380
LRR 5 194..215
leucine-rich repeat 195..218 CDD:275380
LRR_8 218..277 CDD:290566
LRR 6 218..239
leucine-rich repeat 219..242 CDD:275380
LRR 7 242..263
leucine-rich repeat 243..266 CDD:275380
LRR 8 266..287
leucine-rich repeat 267..290 CDD:275380
LRR 9 290..311
leucine-rich repeat 291..314 CDD:275380
LRR_8 294..349 CDD:290566
LRR 10 314..335
leucine-rich repeat 315..338 CDD:275380
LRR 11 338..359
leucine-rich repeat 339..359 CDD:275380
LRR 12 362..383
leucine-rich repeat 363..382 CDD:275380
leucine-rich repeat 387..399 CDD:275378
LRRCT 395..446 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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