DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rk and ADORA2B

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_000667.1 Gene:ADORA2B / 136 HGNCID:264 Length:332 Species:Homo sapiens


Alignment Length:339 Identity:78/339 - (23%)
Similarity:138/339 - (40%) Gaps:83/339 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   762 VVFLLSLLGNGTVVFVLLC----SRSKMDVP-RFLVCNLAAADFFMGIYLGILAIVDAATLGEFR 821
            |:..||:.||     ||:|    :.:.:..| .:.:.:|||||..:|                  
Human    16 VIAALSVAGN-----VLVCAAVGTANTLQTPTNYFLVSLAAADVAVG------------------ 57

  Fly   822 MFAIPWQMSV---LCQ-------LSGFLAVLSSELSVYTLAVITLERNYAITHAIHLNKRLSLKQ 876
            :||||:.:::   .|.       |:.|:.|| ::.|:::|..:.::|..||...:.....::..:
Human    58 LFAIPFAITISLGFCTDFYGCLFLACFVLVL-TQSSIFSLLAVAVDRYLAICVPLRYKSLVTGTR 121

  Fly   877 AGYIMSVGWVFALIMALMPLVG--VSDYRKFAVCLPFETTTGPA------------SLTYVISLM 927
            |..:::|.||.|..:.|.|.:|  ..|........|::.||..:            .::|::...
Human   122 ARGVIAVLWVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCCLVKCLFENVVPMSYMVYFN 186

  Fly   928 FINGCA---FLTLMGCYLKMYW-AIRGSQAWNTND-SR--------IAKRMALLVFTDFLCWSPI 979
            |. ||.   .|.::..|:|::. |.|..|.....| ||        .||.:|::|....|||.|:
Human   187 FF-GCVLPPLLIMLVIYIKIFLVACRQLQRTELMDHSRTTLQREIHAAKSLAMIVGIFALCWLPV 250

  Fly   980 AFFSITAIF----GLQLISLEQAKIFTVFVLPLNSCCNPFLYAIMTKQFKK------DCVTLCKH 1034
            ...:...:|    |..  ..:.|....:.:...||..||.:||...:.|:.      ....||  
Human   251 HAVNCVTLFQPAQGKN--KPKWAMNMAILLSHANSVVNPIVYAYRNRDFRYTFHKIISRYLLC-- 311

  Fly  1035 FEESRVVGGGGPGG 1048
              ::.|..|.|..|
Human   312 --QADVKSGNGQAG 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380
LRR_RI 180..>383 CDD:238064
leucine-rich repeat 183..204 CDD:275380
LRR_8 203..263 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_8 252..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
leucine-rich repeat 301..324 CDD:275380
leucine-rich repeat 325..348 CDD:275380
LRR_RI 327..567 CDD:238064
leucine-rich repeat 349..371 CDD:275380
LRR_8 370..425 CDD:290566
leucine-rich repeat 372..393 CDD:275380
leucine-rich repeat 394..415 CDD:275380
leucine-rich repeat 418..486 CDD:275380
leucine-rich repeat 441..464 CDD:275378
LRR_8 487..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
LRR_8 533..589 CDD:290566
leucine-rich repeat 535..558 CDD:275380
leucine-rich repeat 559..580 CDD:275380
7tm_4 764..>892 CDD:304433 33/142 (23%)
7tm_1 770..1017 CDD:278431 66/292 (23%)
ADORA2BNP_000667.1 7tmA_Adenosine_R_A2B 8..301 CDD:320197 72/311 (23%)
TM helix 1 9..35 CDD:320197 8/23 (35%)
TM helix 2 42..69 CDD:320197 10/44 (23%)
TM helix 3 78..108 CDD:320197 8/30 (27%)
TM helix 4 122..140 CDD:320197 6/17 (35%)
Agonist binding. /evidence=ECO:0000250 173..182 0/8 (0%)
TM helix 5 179..209 CDD:320197 7/30 (23%)
TM helix 6 227..257 CDD:320197 8/29 (28%)
Agonist binding. /evidence=ECO:0000250 247..254 2/6 (33%)
Agonist binding. /evidence=ECO:0000250 266..276 1/11 (9%)
TM helix 7 269..294 CDD:320197 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.